BO26927.complete Sequence
811 bp assembled on 2010-07-02
GenBank Submission: KX798594
> BO26927.complete
GAAGTTATCAGTCGACATGTCAGCATGGAAGATAGCCCCGTGTCGAGCAC
CGGGTATCCCCAAATTGGATGAGCAGGAGGAGAGCGACCTGGTGTCCAGC
GGCATAGATCCCAGCGACGCAGAGGAGGAAACCGATCTGGATGCCGCCTA
CGATGAGCTGGAGGAGATGAAGCAGCGTCTGATCACACTGCGTAATAAGA
TAATAATCACAAATCCAGATGCGTGCCAGGATCTAAAAATTCGGGATCTC
TGGACCCCAGAGGGCGGGGAACTGCAGGAGTTGCGTGACCAGAAGTGCCA
ACTTATTTGCCAACTTCAAGAGGCAACCCAGCACCTGAAGGACTCCCAAA
ATGAGCTCAAGGAACTGGAGACTTGGCGATGCCACCTCCAATTACGCATC
CATCAGGCAAAGCGGCAGCTTAGTCAGTTCGAGAACTTCAAACTGAAGGT
TATCCACCAATTCGGGCTGTGCATCGAGCGTTGGGAGAACCAGAAGACAT
GCAAACTGGACTGCACCACGTACCGCAAGGAAATGGCGGCCCACATCCTT
CACGCGGACAACTCCCGAAAGAGCGTGGTGTACCAAAAATGCCACAAGTC
CTACAGACGCCGCATCCGCGTCGAGCTTATGCTGGTCCGCGTTTTCCTGC
ACAATCTCTTCGAGGCGATGGTCAACGACTTTAGGTTCTTTAGCCGCCAC
ATGAGCATTAACTTCTCCGTTGGATCCACAGACCACACAGTTCCGGAAAC
TCCAATCAACACTGTTTCTTCTTCCGACCAGGAGAGCCGCAAAGCAAGCT
TTCTAGACCAT
BO26927.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:11:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12831-RC | 780 | CG12831-PC | 1..777 | 17..793 | 3885 | 100 | Plus |
| CG12831-RB | 780 | CG12831-PB | 1..777 | 17..793 | 3885 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:11:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12831-RC | 3601 | CG12831-RC | 257..1034 | 16..793 | 3890 | 100 | Plus |
| CG12831-RB | 1051 | CG12831-RB | 257..1034 | 16..793 | 3890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7073201..7073896 | 711..16 | 3480 | 100 | Minus |
| 2R | 25286936 | 2R | 7073062..7073143 | 793..712 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:11:04 has no hits.
BO26927.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:37 Download gff for
BO26927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12831-RB | 222..998 | 17..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:01 Download gff for
BO26927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12831-RB | 222..998 | 17..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:41 Download gff for
BO26927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12831-RB | 258..1034 | 17..795 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:41 Download gff for
BO26927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7073060..7073143 | 712..795 | 97 | <- | Minus |
| 2R | 7073201..7073895 | 17..711 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:01 Download gff for
BO26927.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2960565..2960648 | 712..795 | 97 | <- | Minus |
| arm_2R | 2960706..2961400 | 17..711 | 100 | | Minus |
BO26927.pep Sequence
Translation from 16 to 811
> BO26927.pep
MSAWKIAPCRAPGIPKLDEQEESDLVSSGIDPSDAEEETDLDAAYDELEE
MKQRLITLRNKIIITNPDACQDLKIRDLWTPEGGELQELRDQKCQLICQL
QEATQHLKDSQNELKELETWRCHLQLRIHQAKRQLSQFENFKLKVIHQFG
LCIERWENQKTCKLDCTTYRKEMAAHILHADNSRKSVVYQKCHKSYRRRI
RVELMLVRVFLHNLFEAMVNDFRFFSRHMSINFSVGSTDHTVPETPINTV
SSSDQESRKASFLDH
BO26927.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12831-PC | 259 | CG12831-PC | 1..259 | 1..259 | 1367 | 100 | Plus |
| CG12831-PB | 259 | CG12831-PB | 1..259 | 1..259 | 1367 | 100 | Plus |
