BO26928.complete Sequence
610 bp assembled on 2010-07-02
GenBank Submission: KX795683
> BO26928.complete
GAAGTTATCAGTCGACATGCTGTTCGTATTTGGCTTTGCTAGTTCCTGGG
CCGCAGACTACGAGCTGTTGCTGGAGGACCCTGATATCTTTTCACCCTGC
ACTGAACCGCCGCCGGGATCGATTGGATTCCACGATGCCTTCGATATTGG
CGATCTGGTAGTCGACCAGGACATGGACATCATTCACCTGTCCGAGAGTG
TCACCTCAATCTGGGATGTGGAGCCCACAGATCGCATATCCGCCAGGTTT
GCAATAATGCATTACAACCGCGGCAGCTGGGAACCGACTGTATTTAGCAT
GGCCACGCCGGACTTCTGCGCCTCAATGTTTGATGAGAATCAGTCGTGGT
TTAAGTACTGGACCAAACACATTTCGAACCGCGATGAGGTGATGGAGAAG
TGTTTTAAAACGCGTGGTACCGTTATAATGCACAATCCATTCGATCTGCA
GCTGCGTCTAACGGACATTCGTGGTGCAACTCTCAGGGGTCGTTACAAAG
CTGTGGTCACCTTTGAGGCGGTCGATGAGAAGGATGTGCCACGCCGTAAT
TCCATTTGCTTCGAAATCAGGGGAGAGGCCGAGAAGATAAATGCAAGCTT
TCTAGACCAT
BO26928.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:10:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheB42c-RB | 591 | CG33350-PB | 12..588 | 16..592 | 2885 | 100 | Plus |
CheB38c-RA | 597 | CG14405-PA | 265..360 | 266..361 | 180 | 79.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:10:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheB42c-RB | 1649 | CG33350-RB | 990..1566 | 16..592 | 2885 | 100 | Plus |
CheB38c-RA | 659 | CG14405-RA | 265..360 | 266..361 | 180 | 79.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 6945173..6945399 | 242..16 | 1135 | 100 | Minus |
2R | 25286936 | 2R | 6944941..6945117 | 418..242 | 885 | 100 | Minus |
2R | 25286936 | 2R | 6944697..6944870 | 592..419 | 870 | 100 | Minus |
2L | 23513712 | 2L | 20820449..20820544 | 361..266 | 180 | 79.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:10:55 has no hits.
BO26928.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:36 Download gff for
BO26928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheB42c-RA | 1..576 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:56 Download gff for
BO26928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheB42c-RB | 991..1566 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:37 Download gff for
BO26928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CheB42c-RB | 991..1566 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:37 Download gff for
BO26928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 6944695..6944870 | 419..594 | 98 | <- | Minus |
2R | 6944941..6945117 | 242..418 | 100 | <- | Minus |
2R | 6945174..6945398 | 17..241 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:56 Download gff for
BO26928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 2832200..2832375 | 419..594 | 98 | <- | Minus |
arm_2R | 2832446..2832622 | 242..418 | 100 | <- | Minus |
arm_2R | 2832679..2832903 | 17..241 | 100 | | Minus |
BO26928.pep Sequence
Translation from 16 to 610
> BO26928.pep
MLFVFGFASSWAADYELLLEDPDIFSPCTEPPPGSIGFHDAFDIGDLVVD
QDMDIIHLSESVTSIWDVEPTDRISARFAIMHYNRGSWEPTVFSMATPDF
CASMFDENQSWFKYWTKHISNRDEVMEKCFKTRGTVIMHNPFDLQLRLTD
IRGATLRGRYKAVVTFEAVDEKDVPRRNSICFEIRGEAEKINASFLDH
BO26928.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CheB42c-PB | 196 | CG33350-PB | 5..196 | 1..192 | 1035 | 100 | Plus |
CheB42b-PA | 196 | CG33351-PA | 5..195 | 1..191 | 632 | 57.1 | Plus |
CheB38c-PA | 198 | CG14405-PA | 6..196 | 1..191 | 578 | 50.8 | Plus |
CheB38a-PA | 197 | CG33320-PA | 13..196 | 8..191 | 520 | 47.8 | Plus |
CheB38b-PA | 197 | CG33321-PA | 6..196 | 1..191 | 502 | 44.5 | Plus |