BO26930.complete Sequence
526 bp assembled on 2010-07-02
GenBank Submission: KX798967
> BO26930.complete
GAAGTTATCAGTCGACATGGGTAGCGTTTTAAGTAGATCAGATCAGCCTA
GAGATTCTGTCGCCTACAGAAACTTCCTGACAGTCTACAGGAATCAGCAC
AAACAAATGAGTTCCAATGATGCACTTTTGAGTGCATCACGTGAATGGGG
AACTTTATCGCAGGCTCAGCGGAATCGATATGCTAACATGAAGGACTCCC
CCAAGCGGGGCACAAAAAACATAACGGAGAATGCGGCTGCTCGTAGAAAG
ATTACTAAAAAGAATTCCCGGTCGAAGAGAATTTCTCAGCGGCGGATTCA
AGATAAGGGGTCTGCTTATAAGCCGCTAACCCTCAACAGATCTTACGTAA
TACGGAAGAGTTTGGTTCCCTCAAGAGGCTTTCTAAACTTAGTGCAGTTC
TTCCAAGAGATCCATAGCGAAATGCCAAGATCGTTGGCCGTGAAAGAGGC
TGTTAGTTCCTGGTGCGCTATGAATGCGGATCAGCGTGGCATTTTCATAT
CAGACTTAGCAAGCTTTCTAGACCAT
BO26930.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:10:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpl94D-RA | 495 | CG31281-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
| Tpl94D-RB | 492 | CG31281-PB | 1..489 | 17..508 | 2380 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:10:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpl94D-RA | 1491 | CG31281-RA | 104..595 | 17..508 | 2460 | 100 | Plus |
| Tpl94D-RB | 1488 | CG31281-RB | 104..592 | 17..508 | 2380 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:10:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22966628..22966946 | 190..508 | 1595 | 100 | Plus |
| 3R | 32079331 | 3R | 22966387..22966560 | 17..190 | 870 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:10:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 5717..5746 | 377..406 | 105 | 83.3 | Plus |
BO26930.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:35 Download gff for
BO26930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31281-RA | 87..578 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:51 Download gff for
BO26930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpl94D-RA | 104..595 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:34 Download gff for
BO26930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tpl94D-RA | 104..595 | 17..510 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:34 Download gff for
BO26930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22966387..22966560 | 17..190 | 100 | -> | Plus |
| 3R | 22966629..22966946 | 191..510 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:51 Download gff for
BO26930.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18792109..18792282 | 17..190 | 100 | -> | Plus |
| arm_3R | 18792351..18792668 | 191..510 | 99 | | Plus |
BO26930.pep Sequence
Translation from 16 to 526
> BO26930.pep
MGSVLSRSDQPRDSVAYRNFLTVYRNQHKQMSSNDALLSASREWGTLSQA
QRNRYANMKDSPKRGTKNITENAAARRKITKKNSRSKRISQRRIQDKGSA
YKPLTLNRSYVIRKSLVPSRGFLNLVQFFQEIHSEMPRSLAVKEAVSSWC
AMNADQRGIFISDLASFLDH
BO26930.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tpl94D-PA | 164 | CG31281-PA | 1..164 | 1..164 | 828 | 100 | Plus |
| Tpl94D-PB | 163 | CG31281-PB | 1..163 | 1..164 | 811 | 99.4 | Plus |
