BO26941.complete Sequence
2257 bp assembled on 2010-07-15
GenBank Submission: KX798719
> BO26941.complete
GAAGTTATCAGTCGACATGAGAGCTACCAGAAGCGCTTGGTTGGGCTTTC
TGCTCGAGCTGCTACTCCTCTTTGAAATCCAACTTTGCGATGTGACTGAA
GCCCGACAAAACCATATGAATCGCATGCAGATGAGTGGAAACTTTCCAGA
CTCACGTGAGGAGCAACTGGTGCGCCAAAAAATAGCTACAGATGTGCAAA
AGTATATGAACCTGAGCGCCGATCCCTGTACGGATTTCTTCGAGTATGCC
TGCGGTCAGTGGGGCCGTTATCACAAGCGACAGCTTCGTCCGGATGAGTT
GTCCACTGCCCAGCAACTGATGGAGACCAAAATTTCGGAGCAACTGCAGC
AGCTTCTCACCCAGCCACTGCCGCCGCAACATCATCCGAACGGATATAGT
GGAGCCAGCATGACGAATGTTCGAAAAGTGCGAGCCTTCTACGAATCTTG
CGTCGCAGTGGAAGCAAATGCCAGTGAGAGACGTCGTTTCCTAATGAAGA
TTCTCAAGGATAACGGAGGATTACGCAACGTTCCCAACTCCAACTGGCAG
CACAATCGTCAGTGGGTACAAACACTGGGCGAACTGAGAAGGAACTACGG
ATTGGACATACTTTTGGGTCTGGAAATCGATCTGAATCTGCAAACCATGA
AGGGTAATACCATATACTTTGGTGAGCCCAAGCTCACCATCATTCCAGCT
GAGCACTGCAATGCCTTGGCAACGCGAGGAGCTCAAGTGCGAGATGAGGT
CTACGAGCTGGTGCAGCAGCAGGTGACCGAGAATTTGCGCGATTGGTTTG
GCATGGACACCGGAGAGGCGGCTAGATTTGCAGGAGATATTATTCGTTTC
GAGTTTGAGCTGTGCAAACAAATGGGAGAGCAGGATATTCAGAAGCCAGA
GGAGGAGTTTCCACCCGCCATACAGGCGCAAATTTACGGCGCGCGATCGC
GAACTGGTCAAGAGCGTCTGCGGCGCCAGAAAGGAGGAATGACCCTGACC
GAGCTCACCAGCGAGATGGGAAATCACTTGGACTTTAAAATGCTGGTAGA
GGTCATCCTGGAGAGTCAGTACCCATCCCAAGTCTATCTTCGTTCTCCGG
AATATGTTAAACATGTGGTGAGGACTGTTAAGGCCAATAACCGCATCACC
GTTGGTGGCTACATTCTATACGTGGCCCTGAACGAACTGAATCAGCCGCC
AGAGGAAGCACCTTCACAACGTGCCCGCCAATGCGTCCAGGTGACGCAAC
GTCTCTTTCCGCAAGTTTTGGGTGAGATGTTCCAGCGCCATGTACAGCGC
GATAATGCAAAACATGATCTGGACGCCGTTTTCAACGATGTGATCAAGGC
GCTCGAGGAGCAGTTCCACGTGGAATGGATGGACGAGAACGATCGCAGGG
CGGCCAGAACCAGACTGTCACAATATCGAGTGTCTCTGCCGGATTACCAA
AGTTTGGATCTAACCGATTTGCAGTTCCAGAAGTCAGAAGACTACTGGCG
CCGTTTGGAGATTGCACTAAAGTATCGTTCCCATCAGCAGTTCGAAGCCC
TCAGGGGCAACGATTTTGGTCAGGATGCAGACGGTCTGGATGCATTCGAG
GTGCGAGCTGCTCTATCCCCCCGCCAGCAAATGGTCCTGGTTGGATGGGG
TCTGCTGCAGGCTCCATACTACAATTACTACTACCCAAAGTCTTTGAAAT
ATGCGCTATTGGGCCATCGATTGGCCAGTGCATTGGTTCAGGCATTCGAT
GACGAGGGATGGAACAATCATCCACAGGCGACGGCCCAGTGGAATGAGGT
GACCATGTCTGGTTACCGAAATGCCAGCGAATGCCAACGGGCTCAGTACA
GTAGTTACTTGTACAATGAACCTGGCGAATTTCGCAATGCCACCAGGCTA
AGAGAGATTATAGCCGATGGCAGTGGTCTCAACTTGGCCTTCAACGCGTA
TCTAGCTTGGCTGGAGCAGCAGGATCACAAGCTACGTCCACTACTGGCGA
AGGAAACGCTGTCGGAGTTAAATTTCACCAACACCCAGCTATTCTTCATA
TACTTCGCACAGACGCGCTGCTGGGCAAAGGACAACCAGGATGCCATCCT
GGACTCGATGCCTCTGATGCAGCACACACCGGAGAGATGGGATGTCAATG
GACCGCTCAGCAACTCCGCGGAATTCGGACGAGAGTTCGGCTGTGCCCTG
GGCACACCGATGAATAGTGGCGACAAGTGTTTGGTTTACGCAAGCTTTCT
AGACCAT
BO26941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4725-RA | 2226 | CG4725-PA | 1..2223 | 17..2239 | 11115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:53:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4725-RA | 2267 | CG4725-RA | 6..2228 | 17..2239 | 11115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:53:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22758849..22761071 | 2239..17 | 11115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:53:50 has no hits.
BO26941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 09:53:43 Download gff for
BO26941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4725-RA | 1..2223 | 17..2241 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:57 Download gff for
BO26941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4725-RA | 1..2223 | 17..2241 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:39:39 Download gff for
BO26941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4725-RA | 6..2228 | 17..2241 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:39:39 Download gff for
BO26941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22758846..22761071 | 17..2241 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:57 Download gff for
BO26941.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18584568..18586793 | 17..2241 | 99 | | Minus |
BO26941.pep Sequence
Translation from 16 to 2257
> BO26941.pep
MRATRSAWLGFLLELLLLFEIQLCDVTEARQNHMNRMQMSGNFPDSREEQ
LVRQKIATDVQKYMNLSADPCTDFFEYACGQWGRYHKRQLRPDELSTAQQ
LMETKISEQLQQLLTQPLPPQHHPNGYSGASMTNVRKVRAFYESCVAVEA
NASERRRFLMKILKDNGGLRNVPNSNWQHNRQWVQTLGELRRNYGLDILL
GLEIDLNLQTMKGNTIYFGEPKLTIIPAEHCNALATRGAQVRDEVYELVQ
QQVTENLRDWFGMDTGEAARFAGDIIRFEFELCKQMGEQDIQKPEEEFPP
AIQAQIYGARSRTGQERLRRQKGGMTLTELTSEMGNHLDFKMLVEVILES
QYPSQVYLRSPEYVKHVVRTVKANNRITVGGYILYVALNELNQPPEEAPS
QRARQCVQVTQRLFPQVLGEMFQRHVQRDNAKHDLDAVFNDVIKALEEQF
HVEWMDENDRRAARTRLSQYRVSLPDYQSLDLTDLQFQKSEDYWRRLEIA
LKYRSHQQFEALRGNDFGQDADGLDAFEVRAALSPRQQMVLVGWGLLQAP
YYNYYYPKSLKYALLGHRLASALVQAFDDEGWNNHPQATAQWNEVTMSGY
RNASECQRAQYSSYLYNEPGEFRNATRLREIIADGSGLNLAFNAYLAWLE
QQDHKLRPLLAKETLSELNFTNTQLFFIYFAQTRCWAKDNQDAILDSMPL
MQHTPERWDVNGPLSNSAEFGREFGCALGTPMNSGDKCLVYASFLDH
BO26941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:29:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4725-PA | 741 | CG4725-PA | 1..741 | 1..741 | 3915 | 100 | Plus |
| CG4723-PA | 696 | CG4723-PA | 39..696 | 47..741 | 936 | 32.1 | Plus |
| CG14526-PC | 707 | CG14526-PC | 44..707 | 49..741 | 563 | 24.6 | Plus |
| CG14528-PA | 682 | CG14528-PA | 36..682 | 45..741 | 512 | 24 | Plus |
| CG14527-PA | 700 | CG14527-PA | 37..700 | 49..741 | 504 | 23.5 | Plus |
