Clone BO26944 Report

Search the DGRC for BO26944

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG8038-RA
Protein status:BO26944.pep: Imported from assembly
Sequenced Size:652

Clone Sequence Records

BO26944.complete Sequence

652 bp assembled on 2010-07-02

GenBank Submission: KX794358

> BO26944.complete
GAAGTTATCAGTCGACATGGAACACGCGACAAGTGAATTGAGGGAATTTA
TCTCAGATCTGGTGATTCCGCACCAGCGTTGCAATGTTAACATCAATCCG
GATCACATCACAATGCTGGAGGGCACCAAGATCAAGAAGCAGCACTCCCG
AAAACGTCGCGCCCACAAATCCAGTACGCTGAGTCGCCGGGAATATGCGG
CACTTGGTTTGAACACTCTTCCCACCAAGCAGATGAAGTACGAGGAGGCA
CTGCCACTGCACCACCTGTGGAAGGGCTATGTACGCGAGCATCTGGAGCT
GAGGGAAGGTGACGAGGTGCCCCAGGTGCACGATGCTCGCTACGACGAGT
TCAGCCGCAAGTTGGTGAAACTGGACTTGCACGGTGCCAAGATGAAGGTG
CTGCAGTCCAAGTGCTCCACCCTGGAAAATTTGGCTGGCATCTGCGTCAT
GGACACCAAGAACGTGCTGAAACTGCTCGGCAAGGACCATCGGCTGCGCA
CAATACCCAAGAGCGAGTGCGTCTTTGGTATGAAAGTGGGCAACATGGAG
TTCACCATATTCGGGCAGCACCTCAACATTCGACCCGCCGAGCGAAGCGT
TAAGAAGATCAAGAACTTTGTGAAGCCCTTCATGGCAAGCTTTCTAGACC
AT

BO26944.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG8038-RA 621 CG8038-PA 1..618 17..634 3090 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG8038-RA 846 CG8038-RA 46..663 17..634 3090 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7977988..7978605 634..17 3090 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:09:46 has no hits.

BO26944.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:26 Download gff for BO26944.complete
Subject Subject Range Query Range Percent Splice Strand
CG8038-RA 1..618 17..636 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:25 Download gff for BO26944.complete
Subject Subject Range Query Range Percent Splice Strand
CG8038-RA 46..663 17..636 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:12 Download gff for BO26944.complete
Subject Subject Range Query Range Percent Splice Strand
CG8038-RA 46..663 17..636 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:12 Download gff for BO26944.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7977986..7978605 17..636 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:25 Download gff for BO26944.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7971086..7971705 17..636 99   Minus

BO26944.pep Sequence

Translation from 16 to 652

> BO26944.pep
MEHATSELREFISDLVIPHQRCNVNINPDHITMLEGTKIKKQHSRKRRAH
KSSTLSRREYAALGLNTLPTKQMKYEEALPLHHLWKGYVREHLELREGDE
VPQVHDARYDEFSRKLVKLDLHGAKMKVLQSKCSTLENLAGICVMDTKNV
LKLLGKDHRLRTIPKSECVFGMKVGNMEFTIFGQHLNIRPAERSVKKIKN
FVKPFMASFLDH

BO26944.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:30:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG8038-PA 206 CG8038-PA 1..206 1..206 1080 100 Plus