Clone BO26945 Report

Search the DGRC for BO26945

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG42363-RA
Protein status:BO26945.pep: Imported from assembly
Sequenced Size:496

Clone Sequence Records

BO26945.complete Sequence

496 bp assembled on 2010-07-02

GenBank Submission: KX795896

> BO26945.complete
GAAGTTATCAGTCGACATGACGTCAACAACAAACGTTTTAAGTATTGGAA
ATGAAACCGAGGAACTATATTACAAGGTACAGAAAACAAGCAACCCTAAG
GCATATTTTGAGTTCGAGTTTGAGAACCACATGCGAAAATTACTGCTCAA
TGGCGAAAAACCCAAGGATCTGGATGAAAAGTCCATCGGAAGATTTGCAG
CCACTGAGATAACGAGAAATGGCAAGCAGTACTATGAGTTCGTTCCTGAC
GGATACAAAATTGGAGTCATCATCAGTGGATGCTCATTTCTGCCCAAAGA
CATGGTCTTCCGCGTGAAAAAGAAGATTGCCAAAGAACACTGGGTTAACG
AAAATGTAATTCAATATAAAAAGAATTCAATGCGCCACATACAGGGTATC
GTATCCGAATGCTTGCAGGAAGAGTGCAATGATATCTACCAATATCTATG
TTATCTGAGACAAAATGATCCCAACAAGGCAAGCTTTCTAGACCAT

BO26945.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG42363-RB 465 CG42363-PB 1..462 17..478 2310 100 Plus
CG42363-RA 465 CG42363-PA 1..462 17..478 2310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG42363-RB 1930 CG42363-RB 1014..1475 17..478 2310 100 Plus
CG42363-RA 1587 CG15675-RA 671..1132 17..478 2310 100 Plus
CG42362-RB 1930 CG42362-RB 1014..1475 17..478 2310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21665192..21665653 17..478 2310 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:09:37 has no hits.

BO26945.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:25 Download gff for BO26945.complete
Subject Subject Range Query Range Percent Splice Strand
CG42363-RA 707..1168 17..480 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:21 Download gff for BO26945.complete
Subject Subject Range Query Range Percent Splice Strand
CG42362-RA 707..1168 17..480 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:08 Download gff for BO26945.complete
Subject Subject Range Query Range Percent Splice Strand
CG42362-RB 1014..1475 17..480 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:08 Download gff for BO26945.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21665192..21665653 17..480 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:21 Download gff for BO26945.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17552697..17553158 17..480 99   Plus

BO26945.pep Sequence

Translation from 16 to 496

> BO26945.pep
MTSTTNVLSIGNETEELYYKVQKTSNPKAYFEFEFENHMRKLLLNGEKPK
DLDEKSIGRFAATEITRNGKQYYEFVPDGYKIGVIISGCSFLPKDMVFRV
KKKIAKEHWVNENVIQYKKNSMRHIQGIVSECLQEECNDIYQYLCYLRQN
DPNKASFLDH

BO26945.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG42363-PB 154 CG42363-PB 1..154 1..154 822 100 Plus
CG42363-PA 154 CG15675-PA 1..154 1..154 822 100 Plus
CG42362-PB 152 CG42362-PB 1..148 1..150 290 44.1 Plus
CG42362-PA 152 CG15675-PA 1..148 1..150 290 44.1 Plus