Clone BO26946 Report

Search the DGRC for BO26946

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptAcp63F-RA
Protein status:BO26946.pep: Imported from assembly
Sequenced Size:277

Clone Sequence Records

BO26946.complete Sequence

277 bp assembled on 2010-07-02

GenBank Submission: KX798977

> BO26946.complete
GAAGTTATCAGTCGACATGAAAGCTATCATCGTTTTTATTCTGTTCATTT
CAAGTGTGCATGCTATGAGCAAATGCAACCAAGCAATTTATCTAAATCTT
GATCCTCACTGCGGAATACTTCCCGATTGTAACTTAGATGGTCCAAATCC
AAGTTACCTCAAAAGGGTGTCGTGTGAACGCAAAGAAAACGGAAAACCAG
GATTCATCGAACTAATTCCCGGAAAATGTCTCCATGGTAAACCGCGTTGC
TCGTTAAAAGCAAGCTTTCTAGACCAT

BO26946.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:10:20
Subject Length Description Subject Range Query Range Score Percent Strand
Acp63F-RB 246 CG10852-PB 1..243 17..259 1215 100 Plus
Acp63F-RA 246 CG10852-PA 1..243 17..259 1215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
Acp63F-RB 316 CG10852-RB 10..252 17..259 1215 100 Plus
Acp63F-RA 401 CG10852-RA 10..252 17..259 1215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3816100..3816256 201..45 785 100 Minus
3L 28110227 3L 3815988..3816048 259..199 305 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:10:19 has no hits.

BO26946.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:31 Download gff for BO26946.complete
Subject Subject Range Query Range Percent Splice Strand
Acp63F-RA 10..248 17..255 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:41 Download gff for BO26946.complete
Subject Subject Range Query Range Percent Splice Strand
Acp63F-RA 10..248 17..255 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:24 Download gff for BO26946.complete
Subject Subject Range Query Range Percent Splice Strand
Acp63F-RA 10..248 17..255 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:24 Download gff for BO26946.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3815992..3816046 201..255 100 <- Minus
3L 3816101..3816256 45..200 100 <- Minus
3L 3816318..3816345 17..44 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:41 Download gff for BO26946.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3815992..3816046 201..255 100 <- Minus
arm_3L 3816101..3816256 45..200 100 <- Minus
arm_3L 3816318..3816345 17..44 100   Minus

BO26946.pep Sequence

Translation from 16 to 277

> BO26946.pep
MKAIIVFILFISSVHAMSKCNQAIYLNLDPHCGILPDCNLDGPNPSYLKR
VSCERKENGKPGFIELIPGKCLHGKPRCSLKASFLDH

BO26946.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
Acp63F-PB 81 CG10852-PB 1..81 1..81 444 100 Plus
Acp63F-PA 81 CG10852-PA 1..81 1..81 444 100 Plus