Clone BO26949 Report

Search the DGRC for BO26949

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG10799-RA
Protein status:BO26949.pep: Imported from assembly
Sequenced Size:532

Clone Sequence Records

BO26949.complete Sequence

532 bp assembled on 2010-07-02

GenBank Submission: KX796128

> BO26949.complete
GAAGTTATCAGTCGACATGCGTCGATCTGTTTTGCTGTTCCTAATCTCCG
CCATTGTGCTGAGCGCGGCACTTCCTTTGCCCCCAATTTGGGAGGACTCC
GAATCGGATTCCGAGTATAATGATTATAGTGAGCTATCGAAGCAGCAGAA
TCTGAAGAGCAGTATCGAGAAAACTATCAGCAAGCGAGCTACCAAGGACA
CTAGTAACAGCACGGAAGATGATGAGCTCACGGATGGTAGCAATGAGAAT
GTTAACGATAAAATGGACAGCTCAATGGAATCGTCTTCTATGCTGATCAT
GGCATCCGAGGAAGAATCGGAGTCCGCTGTCAGAAGGCGCAGGTCTGGTG
AGAGGAACAGGAATATAGGGCTCCTGGCCACGATTTGCCCAAATGCTGAT
TTCAGAGATTTGGAGAACGGTATTACCCTAGATTCTAGAATTGAAATAAG
GGATATGTATGCGATTTGTAAAACTCTACCAGAGTCCGGTCGTCTACAGC
AATACAACCGTTCAGCAAGCTTTCTAGACCAT

BO26949.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10799-RA 501 CG10799-PA 1..498 17..514 2490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG10799-RA 592 CG10799-RA 66..563 17..514 2490 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13257951..13258448 17..514 2490 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:09:20 has no hits.

BO26949.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:22 Download gff for BO26949.complete
Subject Subject Range Query Range Percent Splice Strand
CG10799-RA 66..563 17..516 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:12 Download gff for BO26949.complete
Subject Subject Range Query Range Percent Splice Strand
CG10799-RA 66..563 17..516 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:01 Download gff for BO26949.complete
Subject Subject Range Query Range Percent Splice Strand
CG10799-RA 66..563 17..516 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:01 Download gff for BO26949.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13257951..13258448 17..516 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:12 Download gff for BO26949.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9145456..9145953 17..516 99   Plus

BO26949.pep Sequence

Translation from 16 to 532

> BO26949.pep
MRRSVLLFLISAIVLSAALPLPPIWEDSESDSEYNDYSELSKQQNLKSSI
EKTISKRATKDTSNSTEDDELTDGSNENVNDKMDSSMESSSMLIMASEEE
SESAVRRRRSGERNRNIGLLATICPNADFRDLENGITLDSRIEIRDMYAI
CKTLPESGRLQQYNRSASFLDH

BO26949.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG10799-PA 166 CG10799-PA 1..166 1..166 826 100 Plus