BO26955.complete Sequence
646 bp assembled on 2010-07-02
GenBank Submission: KX795236
> BO26955.complete
GAAGTTATCAGTCGACATGGCGTATATTCGAAATTTTCTGAATTCCCCCA
ATGACTGGACCCGACTTAATGAAAATATCAATGGAATAAAGCCACTGAAT
AGCTGCTTTTATTTCTTCAGCTTGAAAACGGGCTGCAATTTGATCGCCGG
ATTCGAAGCATTGGTAAATGTGCTACAAATGTGCAGCATTTACTTGTCGG
AGATGGAGGTCAAGACCACAATCACAACTACGGAGTCACCGGATTCGATG
CTTGTCACTAGGGAACCGGACGGAGATATGCTGGGACCCAACATGAGAAC
GCCTATGTTTGAAACTAACCTCTTCTTCCAAAAAGCACTAATCTCGTTGA
CTATCTTCAGATCAGTGCTACTTATTGTAGGTGCAGAATGGAGTCACATA
TCCTGTCTCGTCCTTTGGATTTGTATTACGGTTATAACCTTGTTAATTAG
CACTTGTAATGATATCATGCAAGATGACGAGCTGCTGACTTTTCTCTTTT
CTACCATTTCTATTTTTCTTGAAATCTATTTCTGCGCAGTGGTTGCCTCC
TTGGTTTTGAAATTGCAGCAAAAACTTCGTCGTAACGTGCAGGAATCGGA
AGTGCTGTTCACACGAATGGAGGAAGTTGCAAGCTTTCTAGACCAT
BO26955.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34188-RA | 615 | CG34188-PA | 1..612 | 17..628 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34188-RA | 806 | CG34188-RA | 50..661 | 17..628 | 3060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15427600..15427974 | 391..17 | 1875 | 100 | Minus |
| 2R | 25286936 | 2R | 15427423..15427547 | 515..391 | 625 | 100 | Minus |
| 2R | 25286936 | 2R | 15427236..15427348 | 628..516 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:09:09 has no hits.
BO26955.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:18 Download gff for
BO26955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34188-RA | 50..661 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:07 Download gff for
BO26955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34188-RA | 50..661 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:56 Download gff for
BO26955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34188-RA | 50..661 | 17..630 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:56 Download gff for
BO26955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15427234..15427348 | 516..630 | 98 | <- | Minus |
| 2R | 15427423..15427546 | 392..515 | 100 | <- | Minus |
| 2R | 15427600..15427974 | 17..391 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:07 Download gff for
BO26955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11314739..11314853 | 516..630 | 98 | <- | Minus |
| arm_2R | 11314928..11315051 | 392..515 | 100 | <- | Minus |
| arm_2R | 11315105..11315479 | 17..391 | 100 | | Minus |
BO26955.pep Sequence
Translation from 16 to 646
> BO26955.pep
MAYIRNFLNSPNDWTRLNENINGIKPLNSCFYFFSLKTGCNLIAGFEALV
NVLQMCSIYLSEMEVKTTITTTESPDSMLVTREPDGDMLGPNMRTPMFET
NLFFQKALISLTIFRSVLLIVGAEWSHISCLVLWICITVITLLISTCNDI
MQDDELLTFLFSTISIFLEIYFCAVVASLVLKLQQKLRRNVQESEVLFTR
MEEVASFLDH
BO26955.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34188-PA | 204 | CG34188-PA | 1..204 | 1..204 | 1046 | 100 | Plus |
| CG30472-PB | 212 | CG30472-PB | 19..185 | 14..186 | 282 | 39.1 | Plus |
