Clone BO26957 Report

Search the DGRC for BO26957

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG34241-RA
Protein status:BO26957.pep: Imported from assembly
Sequenced Size:280

Clone Sequence Records

BO26957.complete Sequence

280 bp assembled on 2010-07-02

GenBank Submission: KX794634

> BO26957.complete
GAAGTTATCAGTCGACATGGATAGGGGTACGTCTTCAAATCAGCCCATCC
TGACCACCTGTGAGATGTATCCGCGCCGAAGGAACACGGAGTTCTACAGA
TCCCCGGAACCGAGAGTCTCCTGCCAAAACCAACGAGCGGAACATCCGGG
GCAGATGCTCAACGTGACTCCCGACGAGAATCGGGAGGCCGTACGAAGAC
TTCCACGAATCCAGCCGCCAAATAATTTGGATAGTGTTTATCTACGCAAT
GGTTACTTTTCGGCAAGCTTTCTAGACCAT

BO26957.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG34241-RA 249 CG34241-PA 1..246 17..262 1230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG34241-RA 427 CG34241-RA 120..366 16..262 1235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12128185..12128400 47..262 1080 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:09:01 has no hits.

BO26957.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:13 Download gff for BO26957.complete
Subject Subject Range Query Range Percent Splice Strand
CG34241-RA 76..321 17..264 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:01 Download gff for BO26957.complete
Subject Subject Range Query Range Percent Splice Strand
CG34241-RA 121..366 17..264 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:53 Download gff for BO26957.complete
Subject Subject Range Query Range Percent Splice Strand
CG34241-RA 121..366 17..264 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:53 Download gff for BO26957.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12128099..12128128 17..46 100 -> Plus
3L 12128185..12128400 47..264 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:01 Download gff for BO26957.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12121199..12121228 17..46 100 -> Plus
arm_3L 12121285..12121500 47..264 99   Plus

BO26957.pep Sequence

Translation from 16 to 280

> BO26957.pep
MDRGTSSNQPILTTCEMYPRRRNTEFYRSPEPRVSCQNQRAEHPGQMLNV
TPDENREAVRRLPRIQPPNNLDSVYLRNGYFSASFLDH

BO26957.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34241-PA 82 CG34241-PA 1..82 1..82 444 100 Plus