BO26958.complete Sequence
340 bp assembled on 2010-07-02
> BO26958.complete
GAAGTTATCAGTCGACATGATGGGCACGCCGGAATTAAAAATCATATTAG
AATTCAGTGCAGGGGCGGAGTTACTATTTGGTAACATAAAACGCCGTGAA
TTGAACTTGGACGGTAAACAAAAATGGACTATTGCTAATCTGCTTAAGTG
GATGCATGCGAATATTTTAACGGAGCGTCCGGAACTTTTTCTTCAAGGAG
ATACTGTGCGACCTGGAATTTTAGTACTCATAAATGATACAGACTGGGAA
TTGCTGGGTGAACTGGACTACGAGCTGCAGCCCAACGACAATGTGTTGTT
TATATCAACTTTACACGGTGGTGCAAGCTTTCTAGACCAT
BO26958.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33276-RB | 306 | CG33276-PB | 1..303 | 20..322 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:09:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33276-RB | 391 | CG33276-RB | 3..308 | 17..322 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7640124..7640210 | 208..122 | 420 | 98.9 | Minus |
| 3L | 28110227 | 3L | 7640269..7640339 | 126..56 | 355 | 100 | Minus |
| 3L | 28110227 | 3L | 7639894..7639960 | 322..256 | 335 | 100 | Minus |
| 3L | 28110227 | 3L | 7640015..7640064 | 257..208 | 250 | 100 | Minus |
| 3L | 28110227 | 3L | 7640404..7640444 | 57..17 | 205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:09:29 has no hits.
BO26958.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:24 Download gff for
BO26958.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33276-RB | 1..306 | 17..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:12:16 Download gff for
BO26958.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33276-RB | 3..308 | 17..324 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:04 Download gff for
BO26958.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33276-RB | 3..308 | 17..324 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:04 Download gff for
BO26958.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7639892..7639959 | 257..324 | 97 | <- | Minus |
| 3L | 7640016..7640064 | 208..256 | 100 | <- | Minus |
| 3L | 7640125..7640206 | 126..207 | 100 | <- | Minus |
| 3L | 7640270..7640337 | 58..125 | 100 | <- | Minus |
| 3L | 7640404..7640444 | 17..57 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:12:16 Download gff for
BO26958.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7633225..7633306 | 126..207 | 100 | <- | Minus |
| arm_3L | 7633370..7633437 | 58..125 | 100 | <- | Minus |
| arm_3L | 7633504..7633544 | 17..57 | 100 | | Minus |
| arm_3L | 7632992..7633059 | 257..324 | 97 | <- | Minus |
| arm_3L | 7633116..7633164 | 208..256 | 100 | <- | Minus |
BO26958.pep Sequence
Translation from 16 to 340
> BO26958.pep
MMGTPELKIILEFSAGAELLFGNIKRRELNLDGKQKWTIANLLKWMHANI
LTERPELFLQGDTVRPGILVLINDTDWELLGELDYELQPNDNVLFISTLH
GGASFLDH
BO26958.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33276-PB | 101 | CG33276-PB | 1..101 | 2..102 | 529 | 100 | Plus |
