BO26962.complete Sequence
871 bp assembled on 2010-07-02
GenBank Submission: KX796953
> BO26962.complete
GAAGTTATCAGTCGACATGTTTATTTTCACGATTTTCAAGATCATTTTGC
TCTGGCCGGGTGCTATGTCACAGTTCCTTGAACCGAATTGTGGCTACCCT
GACATTAGCCCAAAAATAATGCATGGTCAGAATGCAGAAAATGGAACCAA
TCCTTGGATGGCATATATATTTAAATATAATGATAAGGAAGTAGCTGAGC
TCGTATGCGGCGGAACTCTCATTCACAAACAATTCGTTTTGAGTGCAGCC
CATTGCATCAAAAGAGATCAAATACTTGCCGTTCGTCTTGGAGAACATAG
TTCATCAAGGTATTTTGCAGTGACCAAGGCCTTTCGGAACAAGTACTTTA
CAACTGGCAGTTATAGTAACGATATAGGCATACTTCGTATACAACCAATA
GTGAAGTTTAATGCTGTTATCAGGCCCATTTGCATTATCACGGATCCCAC
AAAAGTGCCAAATGTCAAAACCTTCAAGGCTGCAGGCTGGGGAAAAACAG
AAAACGAGACATTTTCGAAGGTGCTTAAAACCGTAGAGTTGAACGAACTC
AATGCATCTGAATGTTACAATATGCTTTGGGTGAATGTAACCGAGAGTCA
GATCTGCGCAGGACATCCGGACGGGGATACGTGCGCGGGCGACTCTGGAG
GTCCATTGATTCATCCGGTATACATGGATGGATCTCTGCGGTACGTGCAA
CTGGGAATCATCAGTTTTGGAAGCTCACTATGCAACAGTCCTGGGGTTTA
TACACGGCTATCAAGCTTTATCGACTGGATTCTTATGGTGGTAGATAACT
ACACGGTACGCAGTCCACCGAAGATTCAGTATCGAGTATGGCCTTACGGT
AAAGCAAGCTTTCTAGACCAT
BO26962.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30083-RB | 840 | CG30083-PB | 1..837 | 17..853 | 4185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30083-RB | 868 | CG30083-RB | 3..839 | 17..853 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:42:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15711626..15712070 | 853..409 | 2210 | 99.8 | Minus |
| 2R | 25286936 | 2R | 15712429..15712642 | 230..17 | 1070 | 100 | Minus |
| 2R | 25286936 | 2R | 15712127..15712263 | 413..277 | 685 | 100 | Minus |
| 2R | 25286936 | 2R | 15712324..15712369 | 276..231 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:42:09 has no hits.
BO26962.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:09 Download gff for
BO26962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30083-RB | 14..839 | 28..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:47 Download gff for
BO26962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30083-RB | 14..839 | 28..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:15:28 Download gff for
BO26962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30083-RB | 14..839 | 28..855 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:15:28 Download gff for
BO26962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15711624..15712065 | 414..855 | 99 | <- | Minus |
| 2R | 15712127..15712263 | 277..413 | 100 | <- | Minus |
| 2R | 15712324..15712369 | 231..276 | 100 | <- | Minus |
| 2R | 15712429..15712631 | 28..230 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:47 Download gff for
BO26962.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11599129..11599570 | 414..855 | 99 | <- | Minus |
| arm_2R | 11599632..11599768 | 277..413 | 100 | <- | Minus |
| arm_2R | 11599829..11599874 | 231..276 | 100 | <- | Minus |
| arm_2R | 11599934..11600136 | 28..230 | 100 | | Minus |
BO26962.pep Sequence
Translation from 16 to 871
> BO26962.pep
MFIFTIFKIILLWPGAMSQFLEPNCGYPDISPKIMHGQNAENGTNPWMAY
IFKYNDKEVAELVCGGTLIHKQFVLSAAHCIKRDQILAVRLGEHSSSRYF
AVTKAFRNKYFTTGSYSNDIGILRIQPIVKFNAVIRPICIITDPTKVPNV
KTFKAAGWGKTENETFSKVLKTVELNELNASECYNMLWVNVTESQICAGH
PDGDTCAGDSGGPLIHPVYMDGSLRYVQLGIISFGSSLCNSPGVYTRLSS
FIDWILMVVDNYTVRSPPKIQYRVWPYGKASFLDH
BO26962.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30083-PB | 279 | CG30083-PB | 1..279 | 1..279 | 1502 | 100 | Plus |
| CG30286-PB | 277 | CG30286-PB | 1..269 | 1..256 | 506 | 37.7 | Plus |
| CG30082-PB | 280 | CR30082-PB | 4..274 | 1..258 | 505 | 40.6 | Plus |
| CG30187-PC | 440 | CG30187-PC | 11..241 | 63..283 | 492 | 44.6 | Plus |
| CG30187-PD | 451 | CG30187-PD | 11..241 | 63..283 | 492 | 44.6 | Plus |
