BO26963.complete Sequence
514 bp assembled on 2010-07-02
GenBank Submission: KX795079
> BO26963.complete
GAAGTTATCAGTCGACATGGCACCCAATCGCAAGGACGGAAAGAAGAATA
TTACGGAAAAGCAGGAAGCGAAAATGTTAGCCGAAGCTGGTGGAAAATCG
GCCAGTGATAGCGATGCGAGCGATACCGAATGGCAAATGGTTCAATTTGT
GGACGATCCGAATGTCCTGCGAGTTGCGATCATAGCTTGTCCTGAGGTGA
CCTTGGGCTTTTTACTGTGTGGCGTTGGCTATCAGAAGGATAGATTTCGC
AACTATATGATGGTTGAGAGCGAGACGCCACAAGAGGATGTGGAGCAGTT
CTTTCTCACGGTTTACAGGAGATCCAATATCGGCATTGTCATCATCGACT
ACGATACGGTGAAAAGGCTTCGTACCATGATGCAACGATGTTCTCAGCTG
CTTCCCGTCCTGGTCACGGTGCCCAACAAATCCTCACTGATCACGTACTT
GGACAAAAAGGAGCGAAATCGGCGACTTCGCCAGCGTGATGCCTATGCAA
GCTTTCTAGACCAT
BO26963.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-RD | 483 | CG15719-PD | 1..480 | 17..496 | 2400 | 100 | Plus |
| CG15719-RC | 483 | CG15719-PC | 1..480 | 17..496 | 2400 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-RD | 747 | CG15719-RD | 70..549 | 17..496 | 2400 | 100 | Plus |
| CG15719-RC | 717 | CG15719-RC | 40..519 | 17..496 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13004153..13004377 | 496..272 | 1125 | 100 | Minus |
| X | 23542271 | X | 13004567..13004744 | 194..17 | 890 | 100 | Minus |
| X | 23542271 | X | 13004430..13004508 | 272..194 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:08:28 has no hits.
BO26963.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:08 Download gff for
BO26963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RB | 1..480 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:43 Download gff for
BO26963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 40..519 | 17..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:38 Download gff for
BO26963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15719-RC | 40..519 | 17..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:38 Download gff for
BO26963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13004151..13004376 | 273..498 | 99 | <- | Minus |
| X | 13004430..13004508 | 194..272 | 100 | <- | Minus |
| X | 13004568..13004744 | 17..193 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:43 Download gff for
BO26963.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12898184..12898409 | 273..498 | 99 | <- | Minus |
| arm_X | 12898463..12898541 | 194..272 | 100 | <- | Minus |
| arm_X | 12898601..12898777 | 17..193 | 100 | | Minus |
BO26963.pep Sequence
Translation from 16 to 514
> BO26963.pep
MAPNRKDGKKNITEKQEAKMLAEAGGKSASDSDASDTEWQMVQFVDDPNV
LRVAIIACPEVTLGFLLCGVGYQKDRFRNYMMVESETPQEDVEQFFLTVY
RRSNIGIVIIDYDTVKRLRTMMQRCSQLLPVLVTVPNKSSLITYLDKKER
NRRLRQRDAYASFLDH
BO26963.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15719-PD | 160 | CG15719-PD | 1..160 | 1..160 | 820 | 100 | Plus |
| CG15719-PC | 160 | CG15719-PC | 1..160 | 1..160 | 820 | 100 | Plus |
