BO26964.complete Sequence
487 bp assembled on 2010-07-02
GenBank Submission: KX798305
> BO26964.complete
GAAGTTATCAGTCGACATGGCAGCCACAACAACAGCAGCGAACAAATCAC
CGCAGCAGCAGCAACACAGACGGCAGCAGCATCTTCAGTGGAGCGCCTGC
ATTATGATAGTCGTGTTCGGACTGTTTTCGATGCTGGCCGGGAACTGTGT
CAATGGGCAAATCGATGGCTACACAGCTGGTGAGGATTACCCCGCCTACG
ACGCCGTGCCAAAGGGTCTGGCCTTCAATTGCCAGGGTCGCCAGCCGGGT
TACTATGCGGACACAGAGACGCGTTGTCAGGTCTGGCATTGGTGCCTCCA
CTCGGGCCATCAGTACTCCTTCCTCTGCCCAAATGGAACCGTATTCAACC
AGGCCGTCAGGGTCTGCGACTGGTGGTCGAATGTGAACTGCGAGGGATCA
GAGCAACTCTACCAGAACAACGACGAACTGTATCGCATCCCAGAGCGCCA
GCAGCAGCTGAATGATGTAGCAAGCTTTCTAGACCAT
BO26964.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13675-RD | 1068 | CG13675-PD | 1..453 | 17..469 | 2265 | 100 | Plus |
| CG13675-RC | 456 | CG13675-PC | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13675-RD | 1494 | CG13675-RD | 187..640 | 16..469 | 2270 | 100 | Plus |
| CG13675-RC | 1399 | CG13675-RC | 92..545 | 16..469 | 2270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8161169..8161359 | 469..279 | 955 | 100 | Minus |
| 3L | 28110227 | 3L | 8164220..8164361 | 157..16 | 710 | 100 | Minus |
| 3L | 28110227 | 3L | 8161421..8161546 | 282..157 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:08:24 has no hits.
BO26964.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:06 Download gff for
BO26964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13675-RC | 93..545 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:41 Download gff for
BO26964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13675-RC | 93..545 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:37 Download gff for
BO26964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13675-RC | 93..545 | 17..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:37 Download gff for
BO26964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8161166..8161357 | 281..471 | 98 | <- | Minus |
| 3L | 8161423..8161545 | 158..280 | 100 | <- | Minus |
| 3L | 8164220..8164360 | 17..157 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:41 Download gff for
BO26964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8154266..8154457 | 281..471 | 98 | <- | Minus |
| arm_3L | 8154523..8154645 | 158..280 | 100 | <- | Minus |
| arm_3L | 8157320..8157460 | 17..157 | 100 | | Minus |
BO26964.pep Sequence
Translation from 16 to 487
> BO26964.pep
MAATTTAANKSPQQQQHRRQQHLQWSACIMIVVFGLFSMLAGNCVNGQID
GYTAGEDYPAYDAVPKGLAFNCQGRQPGYYADTETRCQVWHWCLHSGHQY
SFLCPNGTVFNQAVRVCDWWSNVNCEGSEQLYQNNDELYRIPERQQQLND
VASFLDH
BO26964.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13675-PC | 151 | CG13675-PC | 1..151 | 1..151 | 852 | 100 | Plus |
| CG13675-PD | 355 | CG13675-PD | 1..151 | 1..151 | 852 | 100 | Plus |
| CG14301-PB | 196 | CG14301-PB | 88..176 | 55..143 | 257 | 52.8 | Plus |
| CG14304-PC | 942 | CG14304-PC | 653..738 | 55..140 | 244 | 49.4 | Plus |
| CG14304-PB | 1136 | CG14304-PB | 847..932 | 55..140 | 244 | 49.4 | Plus |
