BO26966.complete Sequence
964 bp assembled on 2010-07-02
GenBank Submission: KX797453
> BO26966.complete
GAAGTTATCAGTCGACATGGCCAGATATCAGAGTAGCCTTAGCCTCGGAA
TCCTTGTGGTCCTGCTAATCGATCAGCTGGCCAACGCCCAGTTCGTTCCG
GGCCCAATCTCTGGACCAATTCCCCGCCAGCAGAGATCGCTCTTTGGGTC
CGGTCCGCCGCCCGGTTGGAGTAGCGGTGGCCTCAGTCACGGCTGGAATA
GTCCCAGCTTTGAGTTTAGCCCGCTGCCGCCATCGCACAGTTCGCATGTG
ACCAAGGACGAGTTGCTGGCCCTGCTAGCCGCCTGGAAGGATGTGGCCAA
GCCGACGACTCCGGCACCGGAGCCAGAGCCCGAGGAGCCCGAACCCGAGC
CGGAGGCCACAACGCCAGCGCCGCCAGAGGATGTGGACGAACCGGAACCG
GAGCCCGAGGCACCGGCACCGGCACCGGCACCAGAGGCGCCAGCTGGTCC
ACCACCCGGCGTTCCCGTCACCGTCTCCCTGCCCGCCCTGGTGCCCATTC
AATTGGCGGCCATGTGGCAACAGCCGGCGCTGGGAGCAGCGGCCGGCGGA
CTGGGTCCTCTAAATCTGGGCGGCCTGGGTCTGGGCGGTGGCATTGCATT
GAACACGCTCGGCGGCGGTGCGGTAGCAGCCGGAGGAGCTATAGCGGCCG
GAGGCGGTGGAGCGGCGGCCGCCGGAGCAGCAGCAGCAGCGTCACGTTCC
GGAGTGGCACGCCCTCGAGCCCGGGCCAGGATCGGAGGACGTGCGTCCAA
TGCCCAGCAGCCCGCCATACGTTTCCCGGTGGCCAATCCGCGCAGCTTCA
CCTCGAACAACTATGTGGCGCCCAGGCCGCGTTATTATCGCGATACGGAG
CCCATGCGCGTCAACGTAATGGCACCACCGCCGCCGTCGCCCTACCAAAT
GGCCAATATCCAGGGTCCCGTTCAGCTGGTGCCCGCCTACTGGCAAGCAA
GCTTTCTAGACCAT
BO26966.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42449-RA | 933 | CG42449-PA | 1..930 | 17..946 | 4650 | 100 | Plus |
CG42449-RB | 846 | CG42449-PB | 1..842 | 17..858 | 4210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42449-RA | 1146 | CG42449-RA | 22..951 | 17..946 | 4650 | 100 | Plus |
CG42449-RB | 1217 | CG42449-RB | 22..863 | 17..858 | 4210 | 100 | Plus |
CG42449-RB | 1217 | CG42449-RB | 934..1022 | 858..946 | 445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 5683261..5684102 | 17..858 | 4210 | 100 | Plus |
X | 23542271 | X | 5684173..5684261 | 858..946 | 445 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:08:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 639..753 | 692..582 | 132 | 62.1 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2783..2860 | 617..694 | 120 | 61.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6776..6849 | 621..694 | 109 | 60.8 | Plus |
BO26966.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:04 Download gff for
BO26966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 22..951 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:34 Download gff for
BO26966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 22..951 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:30 Download gff for
BO26966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42449-RA | 22..951 | 17..948 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:30 Download gff for
BO26966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 5683261..5684102 | 17..858 | 100 | -> | Plus |
X | 5684174..5684261 | 859..948 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:34 Download gff for
BO26966.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 5577294..5578135 | 17..858 | 100 | -> | Plus |
arm_X | 5578207..5578294 | 859..948 | 97 | | Plus |
BO26966.pep Sequence
Translation from 16 to 964
> BO26966.pep
MARYQSSLSLGILVVLLIDQLANAQFVPGPISGPIPRQQRSLFGSGPPPG
WSSGGLSHGWNSPSFEFSPLPPSHSSHVTKDELLALLAAWKDVAKPTTPA
PEPEPEEPEPEPEATTPAPPEDVDEPEPEPEAPAPAPAPEAPAGPPPGVP
VTVSLPALVPIQLAAMWQQPALGAAAGGLGPLNLGGLGLGGGIALNTLGG
GAVAAGGAIAAGGGGAAAAGAAAAASRSGVARPRARARIGGRASNAQQPA
IRFPVANPRSFTSNNYVAPRPRYYRDTEPMRVNVMAPPPPSPYQMANIQG
PVQLVPAYWQASFLDH
BO26966.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42449-PA | 310 | CG42449-PA | 1..310 | 1..310 | 1637 | 100 | Plus |
CG42449-PB | 281 | CG42449-PB | 1..281 | 1..281 | 1475 | 100 | Plus |
CG13358-PD | 301 | CG13358-PB | 10..191 | 10..197 | 230 | 34.8 | Plus |