BO26967.complete Sequence
910 bp assembled on 2010-07-02
GenBank Submission: KX795580
> BO26967.complete
GAAGTTATCAGTCGACATGAAGATCTTCGTAGCTGAAATAGTGCTACTAG
CGAGCTTGGTCCTTGGCGCAAGACTAGGATCCAGCACCCTGCTAACGAAT
GATTGCGGGACAACGAGGCACCCATCGAGAATTCGGCGGGTTGTTGGAGG
TAACGATGCGGACAGGTTCGCCAACCCCTGGATGGTCATGGTGCTCGGAG
AAAACAATGTCTTCTGCAGCGGTTCGCTAATCACTCGTCTTTTTGTCTTG
ACGTCAGCGAGCTGCCTTTTATCGCTTCCCAAACAAGTGATCTTGGGCGA
ATACGACAGGAACTGCACTTCTGCGGATTGCACGTCCATCCGCCAAGTGA
TTGATATCGATCAGAAGATTATCCATGGCCAATTCGGCTTGGAAACCGTC
AAAAAATATGATATTGCGCTACTTCGATTGGCAAAGAAGGTGTCGATCTC
AGACTACGTCAGACCAATTTGCCTGTCCGTCGATCGCCAAGTGGGACGTA
GCGTTCAACATTTCACTGCCACCGGCTGGGGCACTACCGAATGGAATGAA
CCCAGCACCATTTTACAGACAGTCACACTAAGTAAAATCAATAGAAAGTA
TTGTAAAGGCAGGCTAAGGCAGAATATCGATGCATCCCAGCTATGCGTTG
GCGGTCCAAGAAAGGACACTTGTAGTGGAGATGCTGGAGGCCCGCTGAGC
TTAACGTTGAAGATCGATGGTGACGGCAAGTGGAATAATAAATCTCGGGC
TTTTCTCATCGGCATTGTCAGCTATGGTAGTTCATCTTGTAGTGGTATCG
GTGTTTACACAAATGTTGAGCACTATATGGATTGGATTGTAAGAACCATC
AACAAAAGCAATACAGAAAAAATTGCCAACGTCCATAGAAGTGCAAGCTT
TCTAGACCAT
BO26967.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33225-RB | 879 | CG33225-PB | 1..876 | 17..892 | 4380 | 100 | Plus |
| CG33225-RC | 924 | CG33225-PC | 52..921 | 23..892 | 4350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33225-RB | 979 | CG33225-RB | 14..891 | 15..892 | 4390 | 100 | Plus |
| CG33225-RC | 1074 | CG33225-RC | 117..986 | 23..892 | 4350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21591055..21591496 | 451..892 | 2210 | 100 | Plus |
| 2R | 25286936 | 2R | 21590445..21590669 | 15..239 | 1125 | 100 | Plus |
| 2R | 25286936 | 2R | 21590831..21591000 | 283..452 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 21590731..21590773 | 240..282 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:07:55 has no hits.
BO26967.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:03 Download gff for
BO26967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33225-RB | 62..937 | 17..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:30 Download gff for
BO26967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33225-RB | 16..891 | 17..894 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:26 Download gff for
BO26967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33225-RB | 16..891 | 17..894 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:26 Download gff for
BO26967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21590447..21590669 | 17..239 | 100 | -> | Plus |
| 2R | 21590731..21590773 | 240..282 | 100 | -> | Plus |
| 2R | 21590831..21591000 | 283..452 | 100 | -> | Plus |
| 2R | 21591057..21591496 | 453..894 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:30 Download gff for
BO26967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17477952..17478174 | 17..239 | 100 | -> | Plus |
| arm_2R | 17478236..17478278 | 240..282 | 100 | -> | Plus |
| arm_2R | 17478336..17478505 | 283..452 | 100 | -> | Plus |
| arm_2R | 17478562..17479001 | 453..894 | 99 | | Plus |
BO26967.pep Sequence
Translation from 16 to 910
> BO26967.pep
MKIFVAEIVLLASLVLGARLGSSTLLTNDCGTTRHPSRIRRVVGGNDADR
FANPWMVMVLGENNVFCSGSLITRLFVLTSASCLLSLPKQVILGEYDRNC
TSADCTSIRQVIDIDQKIIHGQFGLETVKKYDIALLRLAKKVSISDYVRP
ICLSVDRQVGRSVQHFTATGWGTTEWNEPSTILQTVTLSKINRKYCKGRL
RQNIDASQLCVGGPRKDTCSGDAGGPLSLTLKIDGDGKWNNKSRAFLIGI
VSYGSSSCSGIGVYTNVEHYMDWIVRTINKSNTEKIANVHRSASFLDH
BO26967.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33225-PB | 292 | CG33225-PB | 1..292 | 1..292 | 1519 | 100 | Plus |
| CG33225-PC | 307 | CG33225-PC | 18..307 | 3..292 | 1509 | 100 | Plus |
| CG30288-PC | 282 | CG30288-PC | 1..280 | 1..284 | 514 | 39.6 | Plus |
| CG30414-PC | 305 | CG30414-PC | 8..294 | 11..278 | 490 | 39.5 | Plus |
| CG30414-PB | 305 | CG30414-PB | 8..294 | 11..278 | 490 | 39.5 | Plus |
