Clone BO26970 Report

Search the DGRC for BO26970

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG13876-RA
Protein status:BO26970.pep: Imported from assembly
Sequenced Size:895

Clone Sequence Records

BO26970.complete Sequence

895 bp assembled on 2010-07-02

GenBank Submission: KX799584

> BO26970.complete
GAAGTTATCAGTCGACATGATGATTTCAGACAGTCAGAAGAAAGGACTGC
GGGAGTTACTTCTAAATGACAAGAACTTAACTGTTCTGCTACAGTTGGCC
AAAGGGGCCACCAAAAATATGTGCAAAACCGAAGACCCGGAGGAGGCCCT
TCGTCTGATCACTACACACATTCCAGACATTTACGTACTGCTTTCCAAGC
GCGCTATAAAAAAGGAACTCCTCTTTACGTATTTGAGCAATCGACGCGCT
GACGCAGCCACAGACTTTAGCAAGGCAGACCTCATAGCCAAGGTTATACA
GTATTGGAAGCAGGAGCATAAATCAAGCATAGAGCTTTCCGGAGACCAGA
CTTCCAGCTCACTTCATATTCAGAGCGAAGAGGATTATCCCATTCACACG
ATTGCCCGCAAGTTCGGCGAGTGGTTCTTCGAACGCTTCAACGCAGACGC
CCTTAGTCTGGTGGATTTATGGGCAGATGCGGCTCTACATCTCACGATCA
TAGCCAGTGATGGAATCAATGAGTGGGAGTGTACGACGGCTGCCGAGGTG
TTATCGGCACTAACGAGCGCTAAGCAGCAGTTTGACTTTTACTTTAATCC
AAACCTGACGCACGCCGGAATTCAGGGTCGAATGGACTCGTACGGACATT
TCTTAGTGATCTGCTGCGGCACTCTGCACTCCCGTGATAGCTGCGTCGGA
ATCTTTGAATGTGCCTTCGGGCTTTTTCGGGACCCCTTGGCTGACAACAA
CTGGAAACCCAAAAAAGTGAAGTGCTTCCTTAAAAGTGAAGCTCAGCCCC
CAGAGCTGCACTATCTGTGCTCGAGCGAAACTCTGCAGACAGCTCTGGAG
CTGTCAGTACCCTCTGATGACTTGAACGCAAGCTTTCTAGACCAT

BO26970.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG13876-RA 864 CG13876-PA 1..861 17..877 4305 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG13876-RA 1337 CG13876-RA 55..919 13..877 4325 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 206375..207109 143..877 3675 100 Plus
3L 28110227 3L 206188..206318 13..143 655 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:08:53 has no hits.

BO26970.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:12 Download gff for BO26970.complete
Subject Subject Range Query Range Percent Splice Strand
CG13876-RA 1..861 17..879 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:57 Download gff for BO26970.complete
Subject Subject Range Query Range Percent Splice Strand
CG13876-RA 59..919 17..879 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:51 Download gff for BO26970.complete
Subject Subject Range Query Range Percent Splice Strand
CG13876-RA 59..919 17..879 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:51 Download gff for BO26970.complete
Subject Subject Range Query Range Percent Splice Strand
3L 206192..206318 17..143 100 -> Plus
3L 206376..207109 144..879 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:57 Download gff for BO26970.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 206192..206318 17..143 100 -> Plus
arm_3L 206376..207109 144..879 99   Plus

BO26970.pep Sequence

Translation from 16 to 895

> BO26970.pep
MMISDSQKKGLRELLLNDKNLTVLLQLAKGATKNMCKTEDPEEALRLITT
HIPDIYVLLSKRAIKKELLFTYLSNRRADAATDFSKADLIAKVIQYWKQE
HKSSIELSGDQTSSSLHIQSEEDYPIHTIARKFGEWFFERFNADALSLVD
LWADAALHLTIIASDGINEWECTTAAEVLSALTSAKQQFDFYFNPNLTHA
GIQGRMDSYGHFLVICCGTLHSRDSCVGIFECAFGLFRDPLADNNWKPKK
VKCFLKSEAQPPELHYLCSSETLQTALELSVPSDDLNASFLDH

BO26970.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG13876-PA 287 CG13876-PA 1..287 1..287 1500 100 Plus