BO26970.complete Sequence
895 bp assembled on 2010-07-02
GenBank Submission: KX799584
> BO26970.complete
GAAGTTATCAGTCGACATGATGATTTCAGACAGTCAGAAGAAAGGACTGC
GGGAGTTACTTCTAAATGACAAGAACTTAACTGTTCTGCTACAGTTGGCC
AAAGGGGCCACCAAAAATATGTGCAAAACCGAAGACCCGGAGGAGGCCCT
TCGTCTGATCACTACACACATTCCAGACATTTACGTACTGCTTTCCAAGC
GCGCTATAAAAAAGGAACTCCTCTTTACGTATTTGAGCAATCGACGCGCT
GACGCAGCCACAGACTTTAGCAAGGCAGACCTCATAGCCAAGGTTATACA
GTATTGGAAGCAGGAGCATAAATCAAGCATAGAGCTTTCCGGAGACCAGA
CTTCCAGCTCACTTCATATTCAGAGCGAAGAGGATTATCCCATTCACACG
ATTGCCCGCAAGTTCGGCGAGTGGTTCTTCGAACGCTTCAACGCAGACGC
CCTTAGTCTGGTGGATTTATGGGCAGATGCGGCTCTACATCTCACGATCA
TAGCCAGTGATGGAATCAATGAGTGGGAGTGTACGACGGCTGCCGAGGTG
TTATCGGCACTAACGAGCGCTAAGCAGCAGTTTGACTTTTACTTTAATCC
AAACCTGACGCACGCCGGAATTCAGGGTCGAATGGACTCGTACGGACATT
TCTTAGTGATCTGCTGCGGCACTCTGCACTCCCGTGATAGCTGCGTCGGA
ATCTTTGAATGTGCCTTCGGGCTTTTTCGGGACCCCTTGGCTGACAACAA
CTGGAAACCCAAAAAAGTGAAGTGCTTCCTTAAAAGTGAAGCTCAGCCCC
CAGAGCTGCACTATCTGTGCTCGAGCGAAACTCTGCAGACAGCTCTGGAG
CTGTCAGTACCCTCTGATGACTTGAACGCAAGCTTTCTAGACCAT
BO26970.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13876-RA | 864 | CG13876-PA | 1..861 | 17..877 | 4305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13876-RA | 1337 | CG13876-RA | 55..919 | 13..877 | 4325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 206375..207109 | 143..877 | 3675 | 100 | Plus |
3L | 28110227 | 3L | 206188..206318 | 13..143 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:08:53 has no hits.
BO26970.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:12 Download gff for
BO26970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13876-RA | 1..861 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:57 Download gff for
BO26970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13876-RA | 59..919 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:51 Download gff for
BO26970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13876-RA | 59..919 | 17..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:51 Download gff for
BO26970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 206192..206318 | 17..143 | 100 | -> | Plus |
3L | 206376..207109 | 144..879 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:57 Download gff for
BO26970.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 206192..206318 | 17..143 | 100 | -> | Plus |
arm_3L | 206376..207109 | 144..879 | 99 | | Plus |
BO26970.pep Sequence
Translation from 16 to 895
> BO26970.pep
MMISDSQKKGLRELLLNDKNLTVLLQLAKGATKNMCKTEDPEEALRLITT
HIPDIYVLLSKRAIKKELLFTYLSNRRADAATDFSKADLIAKVIQYWKQE
HKSSIELSGDQTSSSLHIQSEEDYPIHTIARKFGEWFFERFNADALSLVD
LWADAALHLTIIASDGINEWECTTAAEVLSALTSAKQQFDFYFNPNLTHA
GIQGRMDSYGHFLVICCGTLHSRDSCVGIFECAFGLFRDPLADNNWKPKK
VKCFLKSEAQPPELHYLCSSETLQTALELSVPSDDLNASFLDH
BO26970.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13876-PA | 287 | CG13876-PA | 1..287 | 1..287 | 1500 | 100 | Plus |