BO26971.complete Sequence
439 bp assembled on 2010-07-02
GenBank Submission: KX798157
> BO26971.complete
GAAGTTATCAGTCGACATGTCGTCGATTTCTACGATCATTGGATTGTGTC
TTTTGTTCTTTATGCTGAGCAATGTGGATGCTTATGGGCAAAAATGTAGT
CCAGTCTTTGGAAATTGCAACATGCATACAGATTGCTGCAGCGGAAAATG
CTTAACCTACGGCTCACGTTGTGGCTATCCTGCGCACCGTCTTAAAGAAA
CATATTTGAGTGCCAGTGAATTTCAGAGTATCAAAAAACAACGGGCACAT
TCAAACAATGATGAGGTGAAAGTTATTGGTCTACCTAGTGAGTCAGAACC
ATCGAATGTTTTTTTTAAGATTGATTCGGCAGCAAAATGCCACAATGTTG
GTGAACCCTGCTCCCGGGGTGAAGAATGCTGTAATTTGAGATGTCACTCA
TATATGCACAGATGTGTCACCGCAAGCTTTCTAGACCAT
BO26971.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34034-RB | 408 | CG34034-PB | 1..405 | 17..421 | 2025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34034-RB | 637 | CG34034-RB | 12..416 | 17..421 | 2025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21738696..21738938 | 358..116 | 1215 | 100 | Minus |
| 3R | 32079331 | 3R | 21739001..21739099 | 115..17 | 495 | 100 | Minus |
| 3R | 32079331 | 3R | 21738566..21738628 | 421..359 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:08:45 has no hits.
BO26971.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:11 Download gff for
BO26971.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34034-RB | 12..416 | 17..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:52 Download gff for
BO26971.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34034-RB | 12..416 | 17..423 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:47 Download gff for
BO26971.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34034-RB | 12..416 | 17..423 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:47 Download gff for
BO26971.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21739001..21739099 | 17..115 | 100 | | Minus |
| 3R | 21738564..21738628 | 359..423 | 96 | <- | Minus |
| 3R | 21738696..21738938 | 116..358 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:52 Download gff for
BO26971.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17564286..17564350 | 359..423 | 96 | <- | Minus |
| arm_3R | 17564418..17564660 | 116..358 | 100 | <- | Minus |
| arm_3R | 17564723..17564821 | 17..115 | 100 | | Minus |
BO26971.pep Sequence
Translation from 16 to 439
> BO26971.pep
MSSISTIIGLCLLFFMLSNVDAYGQKCSPVFGNCNMHTDCCSGKCLTYGS
RCGYPAHRLKETYLSASEFQSIKKQRAHSNNDEVKVIGLPSESEPSNVFF
KIDSAAKCHNVGEPCSRGEECCNLRCHSYMHRCVTASFLDH
BO26971.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34034-PB | 135 | CG34034-PB | 1..135 | 1..135 | 747 | 100 | Plus |
