Clone BO26972 Report

Search the DGRC for BO26972

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:72
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO26972.pep: Imported from assembly
Sequenced Size:403

Clone Sequence Records

BO26972.complete Sequence

403 bp assembled on 2010-07-02

> BO26972.complete
GAAGTTATCAGTCGACATGCCAGGGAGGCCAGAAAAGCCCATGGAGCTAA
TTAAGCCGCCTCGCATGAGTGCTGTGTGGTTTTCCACGGGGCCAGAGGTT
GAGGGTGGCTCTGCATCAAGGGAAAGCACTAACTGCAACATCAACATCAA
CAGCAACATTAGCAACAAGAGCAACAAAGATGAGAAATCGCTGGCTTCCT
GGCTTCATGAAGAAATAAGTCTAGATTGCCAGTTGGGGAAAAACTTGTTC
ATCTTTGGCTCTAACGAGCTAACGGAGCGACAAGCGGACAAGCGGACAAG
CAGCGGACCAACCGAACTGATGGGCGGACATTCCGGCGGACGGACGGACA
ACTGTGAGCGATTCCACACAAAACAAGACGATGGGGCAAGCTTTCTAGAC
CAT

BO26972.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG33284-RA 348 CG33284-PA 1..345 41..385 1725 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:08:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG33284-RA 1132 CG33284-RA 539..907 17..385 1845 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:08:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21124291..21124659 17..385 1845 100 Plus
Blast to na_te.dros performed 2014-11-28 02:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2358..2445 111..198 161 67.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6837 111..176 149 74.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2356..2408 125..177 148 75.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6848..6954 111..221 139 62.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6782..6846 111..176 138 69.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2362..2413 125..176 134 73.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6793 111..177 133 68.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6813 111..176 128 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6772 123..177 122 69.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2290..2359 103..176 117 66.2 Plus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 1254..1316 288..350 116 68.8 Plus

BO26972.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:10 Download gff for BO26972.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 1..345 41..387 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:47 Download gff for BO26972.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 539..907 17..387 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:42 Download gff for BO26972.complete
Subject Subject Range Query Range Percent Splice Strand
CG33284-RA 539..907 17..387 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:42 Download gff for BO26972.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21124291..21124659 17..387 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:47 Download gff for BO26972.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21117391..21117759 17..387 99   Plus

BO26972.pep Sequence

Translation from 16 to 403

> BO26972.pep
MPGRPEKPMELIKPPRMSAVWFSTGPEVEGGSASRESTNCNININSNISN
KSNKDEKSLASWLHEEISLDCQLGKNLFIFGSNELTERQADKRTSSGPTE
LMGGHSGGRTDNCERFHTKQDDGASFLDH

BO26972.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:29:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG33284-PA 115 CG33284-PA 1..115 9..123 612 100 Plus