Clone BO26975 Report

Search the DGRC for BO26975

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:75
Vector:pDNR-Dual
Associated Gene/TranscriptDpy-30L1-RA
Protein status:BO26975.pep: Imported from assembly
Sequenced Size:436

Clone Sequence Records

BO26975.complete Sequence

436 bp assembled on 2010-07-02

GenBank Submission: KX795903

> BO26975.complete
GAAGTTATCAGTCGACATGGAGGCCAAGACCGACGCACCCATCTCACCAG
CGCCCACAACAAATCCGCCGGCAGAAGCTGGCAAGGAGCCAAATGCAAGC
AGCAATGCGCAAGCAAACCCGACCGCTGCGCCGGGAGCTCCTCCATCCGG
AGCCATTGCCGTTGGCCAGTCCACAAATCCAGTGGCGCAGCAGCAACAGC
AGCCGGCGGTGGCCAAGAAGCCCAGTAGCGAGACAAACAACATGCCCACG
CGACAGTACCTCGACCAGACGGTGGCGCCGGTTCTGCTCCACGGAATGCA
GGCCCTGGCTCGCGAACGGCCCACGGATCCCATACAGTTCCTGGCCTCCT
ACCTACTAAAGCATAGCAACGGGTGCGACGAGAACAACGCCTCCGCCGCC
GCCGTGGACAACAACTCCGCAAGCTTTCTAGACCAT

BO26975.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:06:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-RA 405 CG6444-PA 1..402 17..418 2010 100 Plus
Dpy-30L2-RB 297 CG11591-PB 148..255 254..361 180 77.8 Plus
Dpy-30L2-RA 297 CG11591-PA 148..255 254..361 180 77.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:06:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-RA 655 CG6444-RA 165..567 16..418 2015 100 Plus
Dpy-30L2-RB 506 CG11591-RB 192..299 254..361 180 77.8 Plus
Dpy-30L2-RA 550 CG11591-RA 236..343 254..361 180 77.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:06:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10732817..10733219 16..418 2015 100 Plus
3L 28110227 3L 4047195..4047302 361..254 180 77.8 Minus
Blast to na_te.dros performed on 2014-11-28 02:06:47 has no hits.

BO26975.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:01:36 Download gff for BO26975.complete
Subject Subject Range Query Range Percent Splice Strand
CG6444-RA 71..472 17..420 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:04 Download gff for BO26975.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 166..567 17..420 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:00 Download gff for BO26975.complete
Subject Subject Range Query Range Percent Splice Strand
Dpy-30L1-RA 166..567 17..420 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:00 Download gff for BO26975.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10732818..10733219 17..420 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:04 Download gff for BO26975.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10732818..10733219 17..420 99   Plus

BO26975.pep Sequence

Translation from 16 to 436

> BO26975.pep
MEAKTDAPISPAPTTNPPAEAGKEPNASSNAQANPTAAPGAPPSGAIAVG
QSTNPVAQQQQQPAVAKKPSSETNNMPTRQYLDQTVAPVLLHGMQALARE
RPTDPIQFLASYLLKHSNGCDENNASAAAVDNNSASFLDH

BO26975.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpy-30L1-PA 134 CG6444-PA 1..134 1..134 691 100 Plus
Dpy-30L2-PB 98 CG11591-PB 34..92 64..122 226 67.8 Plus
Dpy-30L2-PA 98 CG11591-PA 34..92 64..122 226 67.8 Plus