Clone BO26977 Report

Search the DGRC for BO26977

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG15422-RA
Protein status:BO26977.pep: Imported from assembly
Sequenced Size:346

Clone Sequence Records

BO26977.complete Sequence

346 bp assembled on 2010-07-02

GenBank Submission: KX796173

> BO26977.complete
GAAGTTATCAGTCGACATGCGGTACTATGAAGATCCATGTGGCTATCCTC
CTCGCCATCACCATGGTCGTCCAAATATCGAAATTGATGTGGTTCCCGGT
TGGGGTGGCGGCTACTATCCGCCGCCGCCTCCGCCTCGGCCCGCCGAGGT
AGTCTACATGACCCCGGCGGCTACCTATGTGCCCGGCACACAGGTGATAA
TGCCGCAACCCTACGGCGGCGTCACGGTGGCCACCACCAATGGATACTAT
CCGCAGCAGCAGCAGCAGGCGTACGAGTATCAGTACCAGTATCAGCAGCC
CTACAACAATCCACCGTATCCGCAGTGGGCAAGCTTTCTAGACCAT

BO26977.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:06:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG15422-RA 315 CG15422-PA 1..312 17..328 1560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:06:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15422-RA 687 CG15422-RA 73..384 17..328 1560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4005056..4005367 17..328 1560 100 Plus
Blast to na_te.dros performed 2014-11-28 02:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2344..2419 249..324 145 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6868 254..312 117 68.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6845..6897 254..308 117 73.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6807 254..324 110 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6794..6846 254..308 108 69.1 Plus
roo 9092 roo DM_ROO 9092bp 1057..1124 231..299 108 63.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6810 254..308 106 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6831 254..308 106 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6785..6861 232..308 105 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6829 254..309 102 66.7 Plus

BO26977.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:01:32 Download gff for BO26977.complete
Subject Subject Range Query Range Percent Splice Strand
CG15422-RA 1..312 17..330 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:02 Download gff for BO26977.complete
Subject Subject Range Query Range Percent Splice Strand
CG15422-RA 73..384 17..330 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:58 Download gff for BO26977.complete
Subject Subject Range Query Range Percent Splice Strand
CG15422-RA 73..384 17..330 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:58 Download gff for BO26977.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4005056..4005367 17..330 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:02 Download gff for BO26977.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4005056..4005367 17..330 99   Plus

BO26977.pep Sequence

Translation from 16 to 346

> BO26977.pep
MRYYEDPCGYPPRHHHGRPNIEIDVVPGWGGGYYPPPPPPRPAEVVYMTP
AATYVPGTQVIMPQPYGGVTVATTNGYYPQQQQQAYEYQYQYQQPYNNPP
YPQWASFLDH

BO26977.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15422-PA 104 CG15422-PA 1..104 1..104 619 100 Plus