Clone BO26981 Report

Search the DGRC for BO26981

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:81
Vector:pDNR-Dual
Associated Gene/TranscriptCG13540-RA
Protein status:BO26981.pep: Imported from assembly
Sequenced Size:418

Clone Sequence Records

BO26981.complete Sequence

418 bp assembled on 2010-07-02

GenBank Submission: KX799472

> BO26981.complete
GAAGTTATCAGTCGACATGGCCAACGATCCCGGTAAGCCGGAAAAGTCCA
GGCCACGCTTCTGCACCCTGTTGAACCATGAGGTCGTCGATCCCAAAGAG
TTCATGGTGCACTTCGCCAAGCGGAGGAAGAATGAAATCATAATCCAGGG
TCAGGTCTGCGGTTGGTGCTACAACATAGATTACTTAAAAGATGAAAAAA
CAAAGTTCAAGAAGAAGCGGCCCAATCTTTCGGATGCGAGCGTCACCAAG
CAGCGCGCCACCTCACCACGAAGAGGAGCAATTGCAGACAACCCTCGTCA
ATTGGGTGGTGATCAGCACTGCTCGGAAAAGAGTTTTGCGCCCTCTGGTG
ACGAAATACCCACACCACGTGATTTGAAGGACAAACCTGGTGACCTTGCC
GCAAGCTTTCTAGACCAT

BO26981.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13540-RB 408 CG13540-PB 22..405 17..400 1920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:06:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG13540-RB 528 CG13540-RB 53..436 17..400 1920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23270584..23270967 17..400 1920 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:06:29 has no hits.

BO26981.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:01:29 Download gff for BO26981.complete
Subject Subject Range Query Range Percent Splice Strand
CG13540-RA 1..384 17..402 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:56 Download gff for BO26981.complete
Subject Subject Range Query Range Percent Splice Strand
CG13540-RB 53..436 17..402 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:54 Download gff for BO26981.complete
Subject Subject Range Query Range Percent Splice Strand
CG13540-RB 53..436 17..402 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:54 Download gff for BO26981.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23270584..23270967 17..402 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:56 Download gff for BO26981.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19158107..19158490 17..402 99   Plus

BO26981.pep Sequence

Translation from 16 to 418

> BO26981.pep
MANDPGKPEKSRPRFCTLLNHEVVDPKEFMVHFAKRRKNEIIIQGQVCGW
CYNIDYLKDEKTKFKKKRPNLSDASVTKQRATSPRRGAIADNPRQLGGDQ
HCSEKSFAPSGDEIPTPRDLKDKPGDLAASFLDH

BO26981.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG13540-PB 135 CG13540-PB 8..135 1..128 694 100 Plus