BO26994.complete Sequence
2317 bp assembled on 2010-07-15
GenBank Submission: KX797310
> BO26994.complete
GAAGTTATCAGTCGACATGGCCGAAGTGGAGAAACCAACGGCGGCCACGC
CCCCGACCGACATCCCCCAGGCCACGGCTGCACCTGCCAGCGAGGCGCCA
GTGGCTGTAACGCCCACAGCGGATACCACCGTGGACGTCGAGCCGGGCAC
CTCGCCCACCCAGGAGCCCAACTCCAATTCGCATCCGCACGACTCCGAGT
ACGACACGGCCAGTGATCTGGAGGGCGGAGAGGACTATGACGACGAGGAG
AGTGCCAGCGGCAGCGCCAGTGGCAGTGGGAGCGAGGAGGAATCTGAGAC
GGACGACGAGGACGATGAGGTGGGCAGCGAAACGGACGATGGCGAAGGGG
AGCAGGCGATGGACCGCTCCGTCGCAGACAGTGAGGCCCAGAAGAAGGTG
GACGAGGATCGCAGCAATCCGCAGTACATCCCAAAGCGGGGCACTTTCTA
CGAGCACGACGATCGGACGGCGGAGACCGAGGGAGAAATCCTGATCGAAC
CCGAAAACGGTGCTGGCCAGGCGGCGGCGGAGCCAAATGGCGAACTCAAT
GGACTTGCGGCCGCCGGTGCCACGCCGACTGGCCAAACGCCACAGATCTC
ACAGGCATCGAAGACCATGCGAAAATGGCAACCAGCTTCAGGCGGTGATC
GCTGGTCTCACGATCGATTCGAGGCCACGGAGCAGGCTCCCAAATCCCGT
GCAGAGTTGCTGCAAACATACGGCTACGACATTAGAAACGAGGACGCACC
ACCCAGAGCCAGACGTCGCCGGCGATATACGCGTGGGCCTAGTAAATACT
CAAGAAACTGGGAGGACGAGCAGGCCTACCTCAAAGCCAGCAATAAGGAG
CGCAAGCCGCCGCGGCCACAGGACTTCCCGGCGCTCAACGAAAGAAAGCC
ACGTGGTCCACGAACATCATCCTCGCGTGAGGAAAAGGAAAACCGACGGT
CCGTCGCTGCTGAAGGCTTGGTTCCAGAGAAGCAACAGCCCTTGGCCAGT
AGCTCCAATCCACACAGATCCCAGGAGCGTGAACGTGAGAGGGAAAGGGA
GCGGGAACGCGATCGAGAGCCCAAGAATCGCAACTTCGGGCGGATGAACG
GCGGCCCCGGACGTCAGAATGGCATGGAATTTAAGAAGAACAACCGTGGA
CAGCAGCTAAGAGAGCGGGAGCGGGGGCCAGACCAACTGGACAACCGTAA
CCAGAAGCCATCCACTCCACGCTCCAACCAACAACAACAGCCGCAGCAGC
AACCTCATCATCAGCAACAGCCACAGCAGCAACGACAGCCGTCCCAGCCG
CAGCAGTCTCCACAGACGCCGCTTTCCACGTCGAACCTTTCGCAGCGGCT
CCAGCAGGTGCAGCAACGCAATGATCCCAGCCATGTGGGCAGTGTCCAGA
TGCATTCTCTGGCTAGCCAAAATCAGGCGCCTCAGCAGCAGCAGCAGCAG
CCACTGCATCAGGAACAACGAAATGCGCCCAAGCGCTACTCCAGCTTGCG
TCGCTCACAGCAGGAGGCATCACAGCACTTGGCTGAGCAGCAGCAACAGC
AGATGCAGCAGCAGTTGCATCTTCAACAGCAACAGCAGCAGCAACAATCG
CAGATCATGATTCAGGACCCCCATGTTCTGATGCAGATCGCCTATCAGCA
ACAGGAGCTGCAGGCCCAACTGCAGACCATGCAACTTGGACCACCTACTG
CCGCAGGAGCAGTTCCAACACCACCAAAGCCACATGCCCCGCCGGCAGCC
GCATATCCGCAAGCACAGGCGGCACCGTACTATGTGACCGGAACGGAGCC
AGTTCCAGTGCCCGTTCCCCAGGCACCGTATGTTAATCCGGCTAGTGCCG
CTTACTTGCCAACCACTCCGGCTGCCGTGGCGTACGCCCAAGCAGGGCCT
CCGGTTGTAACACAACCCACACCGCCGCCCGCTCAGGCGCCGCCCGCAAC
GCAGCCGGCTCAGCCGTATCAGAACTACAACACGGTCGGTGGCACAACCT
ACTTTGTACCGCCGGCTCAAACCACTAGCCGACCAAGTGCTCTGCCCCAG
CGTCGTCCCACCAACGCGATTCCCATTCTCCCGCCCTCCGAAAAGCATAA
GGTCAAGGGTGGAGCGAAGGAGGAGGGCATCTCGGACAACATAGATCACA
TCATTGACAACATGTTCGTGCAGCGACCTTCGGCCTTCCAGGCTACCGGC
GAAGGCGCAACTCCAGGTGGGGGAACAAAGGAAGAGGCGGCAGCCACTCC
ACCGGCTGCCGAGCAGAACCTTCAGCCAGTTCCGGCCACTGGGCAGGAAG
CAAGCTTTCTAGACCAT
BO26994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:16:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| btz-RD | 2421 | CG12878-PD | 1..2283 | 17..2299 | 11415 | 100 | Plus |
| btz-RC | 2286 | CG12878-PC | 1..2283 | 17..2299 | 11415 | 100 | Plus |
| btz-RA | 2286 | CG12878-PA | 1..2283 | 17..2299 | 11415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:16:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| btz-RD | 3009 | CG12878-RD | 212..2494 | 17..2299 | 11415 | 100 | Plus |
| btz-RC | 2671 | CG12878-RC | 141..2423 | 17..2299 | 11415 | 100 | Plus |
| btz-RA | 2742 | CG12878-RA | 212..2494 | 17..2299 | 11415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:16:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27700648..27702930 | 17..2299 | 11415 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 05:16:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..6957 | 1507..1738 | 253 | 58.8 | Plus |
BO26994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 13:46:58 Download gff for
BO26994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| btz-RA | 312..2594 | 17..2301 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:36 Download gff for
BO26994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| btz-RA | 212..2494 | 17..2301 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:47:23 Download gff for
BO26994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| btz-RA | 212..2494 | 17..2301 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:47:23 Download gff for
BO26994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27700648..27702930 | 17..2301 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:36 Download gff for
BO26994.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23526370..23528652 | 17..2301 | 99 | | Plus |
BO26994.pep Sequence
Translation from 16 to 2317
> BO26994.pep
MAEVEKPTAATPPTDIPQATAAPASEAPVAVTPTADTTVDVEPGTSPTQE
PNSNSHPHDSEYDTASDLEGGEDYDDEESASGSASGSGSEEESETDDEDD
EVGSETDDGEGEQAMDRSVADSEAQKKVDEDRSNPQYIPKRGTFYEHDDR
TAETEGEILIEPENGAGQAAAEPNGELNGLAAAGATPTGQTPQISQASKT
MRKWQPASGGDRWSHDRFEATEQAPKSRAELLQTYGYDIRNEDAPPRARR
RRRYTRGPSKYSRNWEDEQAYLKASNKERKPPRPQDFPALNERKPRGPRT
SSSREEKENRRSVAAEGLVPEKQQPLASSSNPHRSQERERERERERERDR
EPKNRNFGRMNGGPGRQNGMEFKKNNRGQQLRERERGPDQLDNRNQKPST
PRSNQQQQPQQQPHHQQQPQQQRQPSQPQQSPQTPLSTSNLSQRLQQVQQ
RNDPSHVGSVQMHSLASQNQAPQQQQQQPLHQEQRNAPKRYSSLRRSQQE
ASQHLAEQQQQQMQQQLHLQQQQQQQQSQIMIQDPHVLMQIAYQQQELQA
QLQTMQLGPPTAAGAVPTPPKPHAPPAAAYPQAQAAPYYVTGTEPVPVPV
PQAPYVNPASAAYLPTTPAAVAYAQAGPPVVTQPTPPPAQAPPATQPAQP
YQNYNTVGGTTYFVPPAQTTSRPSALPQRRPTNAIPILPPSEKHKVKGGA
KEEGISDNIDHIIDNMFVQRPSAFQATGEGATPGGGTKEEAAATPPAAEQ
NLQPVPATGQEASFLDH
BO26994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:36:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| btz-PD | 806 | CG12878-PD | 1..761 | 1..761 | 4004 | 100 | Plus |
| btz-PC | 761 | CG12878-PC | 1..761 | 1..761 | 4004 | 100 | Plus |
| btz-PA | 761 | CG12878-PA | 1..761 | 1..761 | 4004 | 100 | Plus |
| btz-PB | 782 | CG12878-PB | 22..782 | 1..761 | 4004 | 100 | Plus |
| Atx2-PA | 888 | CG5166-PA | 188..818 | 67..689 | 291 | 24.6 | Plus |
