Clone BO27009 Report

Search the DGRC for BO27009

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:270
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG15841-RA
Protein status:BO27009.pep: Imported from assembly
Sequenced Size:163

Clone Sequence Records

BO27009.complete Sequence

163 bp assembled on 2010-07-02

GenBank Submission: KX796688

> BO27009.complete
GAAGTTATCAGTCGACATGGAAGTGGAAATGTGGTTCAAAATATCAGCAC
TTCTCAAGGCTGTAACAAAAACTGCACTCTGTTTTTATAAATACAAATAT
CCACAAATATCTGGTCTTAACATGGCAACATTTCAAGTCTTCCAAGCAAG
CTTTCTAGACCAT

BO27009.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 02:13:55 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
Acp33A-RA 340 CG6555-RA 188..316 17..145 645 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:13:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11591363..11591491 145..17 645 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:13:54 has no hits.

BO27009.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 12:46:22 Download gff for BO27009.complete
Subject Subject Range Query Range Percent Splice Strand
CG15841-RA 188..316 17..147 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:14:16 Download gff for BO27009.complete
Subject Subject Range Query Range Percent Splice Strand
CG15841-RA 188..316 17..147 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:46 Download gff for BO27009.complete
Subject Subject Range Query Range Percent Splice Strand
Acp33A-RA 188..316 17..147 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:46 Download gff for BO27009.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11591361..11591491 17..147 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:14:16 Download gff for BO27009.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11591361..11591491 17..147 98   Minus

BO27009.pep Sequence

Translation from 16 to 163

> BO27009.pep
MEVEMWFKISALLKAVTKTALCFYKYKYPQISGLNMATFQVFQASFLDH
Sequence BO27009.pep has no blast hits.