Clone BO27021 Report

Search the DGRC for BO27021

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:270
Well:21
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO27021.pep: Imported from assembly
Sequenced Size:949

Clone Sequence Records

BO27021.complete Sequence

949 bp assembled on 2010-07-02

> BO27021.complete
GAAGTTATCAGTCGACATGAAGTGTAATTTTAAGGTGGCCCGGCTGAGGG
GTTTTAGTTTCGATTGTACCGCGCATATACCAACCATGACAAATAGGTGG
AATCTTACGGTGCTGCTGGGTCTGACTCTGCTGGCTCTTCAGGGGCCAAC
GGAAGCCATGAGGATGCGAGGAGAACCACTTCCGGGTTTGGCCAATATCG
AGAGGCATCGCTCCACCGAAGCTGTGCCCCAAGGTCGTGTGATCGGTGGC
ACCACCGCCGCCGAGGGCAACTGGCCCTGGATAGCAAGTATCCAAAATGC
ATACTCGTATCACTTGTGCGGAGCCATCATACTCGACGAAACTTGGGTGC
TCACAGCGGCCAGTTGCGTGGCGGGATTGAGGCCATTAAATCTGCTGGTT
GTGACTGGAACTGTGGACTGGTGGGATCTGTATGCTCCGTACTACACTGT
GAGCCAGATCCATGTGCACTGCAACTTCGACAAGCCGCTGTATCACAATG
ACATAGCCCTGCTGCAGTTGTCGTCCAAAATCGAGTTCAACGATGTGACA
AAGAATATAACCTTGGCGGATATCGATGAATTGGAAGAGGGGGATAAGTT
GACCTTTGCCGGTTGGGGCAGCTCCGAGGCCATGGGCACCTATGGTCGCT
ATCTGCAGGAGGCATCCGGCACATATCTGCCGGTGGACGCATGCCGGGAG
AAGTTGCAGAACCAAGATGATGTGGACCTGGGTCATGTGTGTGTCCAAAT
GGACGCGGGCCAGGGCGCCTGCCATGGCGACACTGGCGGACCGCTTATCG
ATGAGCAGCAGCGCTTGGTAGGCATCGGTAATTGGGGTGTGCCATGCGGA
CGTGGCTATCCGGATGTGTATGCGCGTACTGCCTTCTACCACGATTGGAT
CCGCACCACCATGAATGGATGTACGATCGCCGCAAGCTTTCTAGACCAT

BO27021.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG31266-RB 849 CG31266-PB 1..846 86..931 4230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG31266-RB 993 CG31266-RB 1..869 63..931 4345 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17132616..17133462 17..863 4235 100 Plus
3R 32079331 3R 17133526..17133595 862..931 350 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:07:23 has no hits.

BO27021.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:01:52 Download gff for BO27021.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 1363..2277 17..933 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:19 Download gff for BO27021.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 1..869 63..933 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:15 Download gff for BO27021.complete
Subject Subject Range Query Range Percent Splice Strand
CG31266-RB 1..869 63..933 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:15 Download gff for BO27021.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17132616..17133461 17..862 100 -> Plus
3R 17133527..17133595 863..933 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:19 Download gff for BO27021.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12959249..12959317 863..933 97   Plus
arm_3R 12958338..12959183 17..862 100 -> Plus

BO27021.pep Sequence

Translation from 16 to 949

> BO27021.pep
MKCNFKVARLRGFSFDCTAHIPTMTNRWNLTVLLGLTLLALQGPTEAMRM
RGEPLPGLANIERHRSTEAVPQGRVIGGTTAAEGNWPWIASIQNAYSYHL
CGAIILDETWVLTAASCVAGLRPLNLLVVTGTVDWWDLYAPYYTVSQIHV
HCNFDKPLYHNDIALLQLSSKIEFNDVTKNITLADIDELEEGDKLTFAGW
GSSEAMGTYGRYLQEASGTYLPVDACREKLQNQDDVDLGHVCVQMDAGQG
ACHGDTGGPLIDEQQRLVGIGNWGVPCGRGYPDVYARTAFYHDWIRTTMN
GCTIAASFLDH

BO27021.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31266-PB 282 CG31266-PB 1..282 24..305 1535 100 Plus
CG31267-PA 275 CG31267-PA 11..275 34..305 640 44.1 Plus
CG5246-PA 272 CG5246-PA 31..265 64..299 527 43.7 Plus
CG31265-PA 266 CG31265-PA 3..260 33..301 493 39.8 Plus
CG31269-PB 273 CG31269-PB 6..268 30..308 485 39.8 Plus