BO27021.complete Sequence
949 bp assembled on 2010-07-02
> BO27021.complete
GAAGTTATCAGTCGACATGAAGTGTAATTTTAAGGTGGCCCGGCTGAGGG
GTTTTAGTTTCGATTGTACCGCGCATATACCAACCATGACAAATAGGTGG
AATCTTACGGTGCTGCTGGGTCTGACTCTGCTGGCTCTTCAGGGGCCAAC
GGAAGCCATGAGGATGCGAGGAGAACCACTTCCGGGTTTGGCCAATATCG
AGAGGCATCGCTCCACCGAAGCTGTGCCCCAAGGTCGTGTGATCGGTGGC
ACCACCGCCGCCGAGGGCAACTGGCCCTGGATAGCAAGTATCCAAAATGC
ATACTCGTATCACTTGTGCGGAGCCATCATACTCGACGAAACTTGGGTGC
TCACAGCGGCCAGTTGCGTGGCGGGATTGAGGCCATTAAATCTGCTGGTT
GTGACTGGAACTGTGGACTGGTGGGATCTGTATGCTCCGTACTACACTGT
GAGCCAGATCCATGTGCACTGCAACTTCGACAAGCCGCTGTATCACAATG
ACATAGCCCTGCTGCAGTTGTCGTCCAAAATCGAGTTCAACGATGTGACA
AAGAATATAACCTTGGCGGATATCGATGAATTGGAAGAGGGGGATAAGTT
GACCTTTGCCGGTTGGGGCAGCTCCGAGGCCATGGGCACCTATGGTCGCT
ATCTGCAGGAGGCATCCGGCACATATCTGCCGGTGGACGCATGCCGGGAG
AAGTTGCAGAACCAAGATGATGTGGACCTGGGTCATGTGTGTGTCCAAAT
GGACGCGGGCCAGGGCGCCTGCCATGGCGACACTGGCGGACCGCTTATCG
ATGAGCAGCAGCGCTTGGTAGGCATCGGTAATTGGGGTGTGCCATGCGGA
CGTGGCTATCCGGATGTGTATGCGCGTACTGCCTTCTACCACGATTGGAT
CCGCACCACCATGAATGGATGTACGATCGCCGCAAGCTTTCTAGACCAT
BO27021.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31266-RB | 849 | CG31266-PB | 1..846 | 86..931 | 4230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31266-RB | 993 | CG31266-RB | 1..869 | 63..931 | 4345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17132616..17133462 | 17..863 | 4235 | 100 | Plus |
3R | 32079331 | 3R | 17133526..17133595 | 862..931 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:07:23 has no hits.
BO27021.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:01:52 Download gff for
BO27021.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31266-RB | 1363..2277 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:19 Download gff for
BO27021.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31266-RB | 1..869 | 63..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:15 Download gff for
BO27021.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31266-RB | 1..869 | 63..933 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:15 Download gff for
BO27021.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17132616..17133461 | 17..862 | 100 | -> | Plus |
3R | 17133527..17133595 | 863..933 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:19 Download gff for
BO27021.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12959249..12959317 | 863..933 | 97 | | Plus |
arm_3R | 12958338..12959183 | 17..862 | 100 | -> | Plus |
BO27021.pep Sequence
Translation from 16 to 949
> BO27021.pep
MKCNFKVARLRGFSFDCTAHIPTMTNRWNLTVLLGLTLLALQGPTEAMRM
RGEPLPGLANIERHRSTEAVPQGRVIGGTTAAEGNWPWIASIQNAYSYHL
CGAIILDETWVLTAASCVAGLRPLNLLVVTGTVDWWDLYAPYYTVSQIHV
HCNFDKPLYHNDIALLQLSSKIEFNDVTKNITLADIDELEEGDKLTFAGW
GSSEAMGTYGRYLQEASGTYLPVDACREKLQNQDDVDLGHVCVQMDAGQG
ACHGDTGGPLIDEQQRLVGIGNWGVPCGRGYPDVYARTAFYHDWIRTTMN
GCTIAASFLDH
BO27021.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31266-PB | 282 | CG31266-PB | 1..282 | 24..305 | 1535 | 100 | Plus |
CG31267-PA | 275 | CG31267-PA | 11..275 | 34..305 | 640 | 44.1 | Plus |
CG5246-PA | 272 | CG5246-PA | 31..265 | 64..299 | 527 | 43.7 | Plus |
CG31265-PA | 266 | CG31265-PA | 3..260 | 33..301 | 493 | 39.8 | Plus |
CG31269-PB | 273 | CG31269-PB | 6..268 | 30..308 | 485 | 39.8 | Plus |