BO27022.complete Sequence
778 bp assembled on 2010-07-02
GenBank Submission: KX795309
> BO27022.complete
GAAGTTATCAGTCGACATGGCGACGCTATGGCTCGTGCTCCACCTGATCC
CACTTTGCTGGGCGGCCAGCAACGAGGCCAACAGTCGGATTGTGGGCGGT
GTACCGGTGGACATCGCTAGTGTGCCCTACTTGGTGAACCTGCGCATCGG
TGGCAACTTTATGTGCGGCGGTTCATTGGTTACCCCCCAGCATGTTGTCA
CCGCTGCCCACTGCGTCAAGGGAATTGGCGCTTCTCGTATCCTAGTCGTT
GCCGGGGTAACGAGACTTACGGAGACGGGTGTCAGAAGTGGTGTGGACAA
GGTTTATACCCCAAAGGCTTACAACACCCGCACCCTCACCTCGGACGTGG
CTGTTTTAAAACTAAAAGCTCCCATCAGCGGTCCCAAAGTGTCCACCATT
GAGCTGTGCAATACCAGCTTCAAGGCAGGCGATCTGATCAAGGTCTCTGG
CTGGGGACAAATTACGGAGCGCAACAAGGCAGTTTCAATGCAGGTGCGCA
GCGTAGATGTGGCGCTCATTCCGCGTAAGGCATGCATGAGCCAGTATAAG
CTGCGCGGAACCATCACCAACACCATGTTTTGCGCCTCAGTGCCTGGCGT
CAAGGATGCCTGCGAAGGCGACTCTGGAGGACCTGCCGTCTATCAGGGTC
AACTATGCGGAATTGTCTCGTGGGGCGTTGGATGCGCACGAAAGAGTTCG
CCGGGAGTCTATACCAATGTCAAGACTGTTAGGAGCTTTATCGACAAGGC
TTTGGGCATGGCAAGCTTTCTAGACCAT
BO27022.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32271-RA | 747 | CG32271-PA | 1..744 | 17..760 | 3720 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32271-RA | 925 | CG32271-RA | 103..846 | 17..760 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3202317..3203060 | 760..17 | 3720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:07:41 has no hits.
BO27022.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:00 Download gff for
BO27022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32271-RA | 1..744 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:25 Download gff for
BO27022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32271-RA | 103..846 | 17..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:22 Download gff for
BO27022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32271-RA | 103..846 | 17..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:22 Download gff for
BO27022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3202315..3203060 | 17..762 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:25 Download gff for
BO27022.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3202315..3203060 | 17..762 | 99 | | Minus |
BO27022.pep Sequence
Translation from 16 to 778
> BO27022.pep
MATLWLVLHLIPLCWAASNEANSRIVGGVPVDIASVPYLVNLRIGGNFMC
GGSLVTPQHVVTAAHCVKGIGASRILVVAGVTRLTETGVRSGVDKVYTPK
AYNTRTLTSDVAVLKLKAPISGPKVSTIELCNTSFKAGDLIKVSGWGQIT
ERNKAVSMQVRSVDVALIPRKACMSQYKLRGTITNTMFCASVPGVKDACE
GDSGGPAVYQGQLCGIVSWGVGCARKSSPGVYTNVKTVRSFIDKALGMAS
FLDH
BO27022.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32271-PA | 248 | CG32271-PA | 1..248 | 1..248 | 1284 | 100 | Plus |
| CG3650-PA | 249 | CG3650-PA | 1..247 | 4..246 | 550 | 44.8 | Plus |
| CG33159-PA | 257 | CG33159-PA | 7..252 | 4..246 | 484 | 42.7 | Plus |
| CG32270-PA | 259 | CG32270-PA | 30..251 | 24..242 | 475 | 45.5 | Plus |
| CG32269-PB | 332 | CG32269-PB | 100..324 | 16..241 | 447 | 40.5 | Plus |
