Clone BO27068 Report

Search the DGRC for BO27068

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:270
Well:68
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO27068.pep: Imported from assembly
Sequenced Size:352

Clone Sequence Records

BO27068.complete Sequence

352 bp assembled on 2010-07-02

> BO27068.complete
GAAGTTATCAGTCGACATGTACGTTTTGATTTTGGAATACTTTTATGTAA
TGGTGAAAGTGGAGGTGGAATACTGCGGCATCTGCAACTTTAGCGGGCAG
TGCCACCTGCTGCGCGAGTTCCTGCTGGCCTCGTCGCCCGACTTGGACAT
ATCCTGTCGCACGGGACGGCGGGGATCCTTCGAGGTGTCCATCGACGGTC
AGCTAGTGCACTCGAAGCTTTCCTGCCTGGCATTTCCCCAGCACGCGAGT
GTCCTGGCCCAAGTGCAGAAGGCGGAGCGTGGAGAGCCCGTGGAGAAAGT
CCTGGAGCAGCCCATCAAGGACTGCGTCGTGATGGCAAGCTTTCTAGACC
AT

BO27068.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG15456-RB 288 CG15456-PB 1..285 50..334 1425 100 Plus
CG15456-RA 288 CG15456-PA 1..285 50..334 1425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG15456-RB 500 CG15456-RB 20..337 17..334 1590 100 Plus
CG15456-RA 477 CG15456-RA 20..337 17..334 1590 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20426649..20426908 334..75 1300 100 Minus
X 23542271 X 20426965..20427023 75..17 295 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:07:09 has no hits.

BO27068.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:01:46 Download gff for BO27068.complete
Subject Subject Range Query Range Percent Splice Strand
CG15456-RA 1..285 50..336 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:13 Download gff for BO27068.complete
Subject Subject Range Query Range Percent Splice Strand
CG15456-RA 20..337 17..336 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:08 Download gff for BO27068.complete
Subject Subject Range Query Range Percent Splice Strand
CG15456-RA 20..337 17..336 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:08 Download gff for BO27068.complete
Subject Subject Range Query Range Percent Splice Strand
X 20426646..20426907 76..336 99 <- Minus
X 20426965..20427023 17..75 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:13 Download gff for BO27068.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20297673..20297934 76..336 99 <- Minus
arm_X 20297992..20298050 17..75 100   Minus

BO27068.pep Sequence

Translation from 16 to 352

> BO27068.pep
MYVLILEYFYVMVKVEVEYCGICNFSGQCHLLREFLLASSPDLDISCRTG
RRGSFEVSIDGQLVHSKLSCLAFPQHASVLAQVQKAERGEPVEKVLEQPI
KDCVVMASFLDH

BO27068.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG15456-PB 95 CG15456-PB 1..95 12..106 494 100 Plus
CG15456-PA 95 CG15456-PA 1..95 12..106 494 100 Plus