Clone BO27086 Report

Search the DGRC for BO27086

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:270
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG13332-RA
Protein status:BO27086.pep: Imported from assembly
Sequenced Size:457

Clone Sequence Records

BO27086.complete Sequence

457 bp assembled on 2010-07-02

GenBank Submission: KX799221

> BO27086.complete
GAAGTTATCAGTCGACATGTCCACCGACGAGGATTCCCTGGGCAGTCCCC
TCAAGCCGGCCACGCCCACACCCGGCGAGCGCGAACCGACGCGAGAACGC
CATCGAGGCGGTCGATCTGGAGCCTCGGATCTGCTGCGCCATCAGCAGAG
CTTTGAGGCTCGCTACAGCGGGATCATCCAGAAGCAAATCTGGGAGACGA
GCATCAACAAGGATGTGCTGGAACGTCAGCTAAATGCGTACTTCCCTTTC
TCCAGGAGCGCCTCGCTGACCAAGGACGCATCCGGCGGATTCGATCAGCT
CCTGGCGCCGGCGACAAGTGGAACTGGTCCGAAGTCTCGATCCCTGGCCA
CCACGCCCACCAGGCGACCGGCGGGCGTCTGTCTGGAGAAGCTGGAGACG
GTGGATGTGGCCTCCCTCGATCAACAGAAGCAAGCGAAGGCAAGCTTTCT
AGACCAT

BO27086.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-RA 426 CG13332-PA 1..423 17..439 2115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-RA 1072 CG13332-RA 102..525 16..439 2120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13525478..13525901 16..439 2120 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:07:06 has no hits.

BO27086.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:01:45 Download gff for BO27086.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 1..423 17..441 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:11:11 Download gff for BO27086.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 103..525 17..441 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:22:08 Download gff for BO27086.complete
Subject Subject Range Query Range Percent Splice Strand
CG13332-RA 103..525 17..441 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:22:08 Download gff for BO27086.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13525479..13525901 17..441 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:11:11 Download gff for BO27086.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9412984..9413406 17..441 99   Plus

BO27086.pep Sequence

Translation from 16 to 457

> BO27086.pep
MSTDEDSLGSPLKPATPTPGEREPTRERHRGGRSGASDLLRHQQSFEARY
SGIIQKQIWETSINKDVLERQLNAYFPFSRSASLTKDASGGFDQLLAPAT
SGTGPKSRSLATTPTRRPAGVCLEKLETVDVASLDQQKQAKASFLDH

BO27086.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG13332-PA 141 CG13332-PA 1..141 1..141 721 100 Plus