BO27124.complete Sequence
1867 bp assembled on 2010-10-15
GenBank Submission: KX795631
> BO27124.complete
GAAGTTATCAGTCGACATGAATCGTATATCGAATCCTTCGCGTCGCCAGG
CGAGTGACGTCTTCATTGGTGACCCCTTCAAAATTCACTCATACAACTTT
CGCTATGCCGACAAGCCATTTTATCCGGTCCAGAACTATCAAAGACCTCC
GGCGGCACCGACTCCGCCGGCACTGGTGAAGAAGGCCTCCTTCCAGACCT
TCTACCACAATCCCAGATTCAGCCAGGATCCCGAGTACATTCCGGCAAAA
AAGAGTCCACAAACTAGCTCCTATAGGCGTCGCCTTTTGCTGGAATCTAT
GGATATGCCCTTGGGATCTACGGTGACAACGCCGGAGAGACAGAGTGTAC
CGGTGGCTCCGCAGACGAAGCGTTCTCCCACAGCCACGGATTCGCCGCTC
CTCAGGACATGCTGTCAAAGTGTGCGCTACGAGGCTATGAGACGGGGTCC
AAGCAACACGACTTTGTGCCAGAGTACCACGAATCTCATACGATCAGCTG
GCGGCGGTGTGCCTTCTACTTCAACCACCACCTTCTCCATGGACTCCAAC
GCCCATCTGCAGAACAGAAGAAGCGGCTGCGGTATCAGCATCGACATCTG
CAGTGTGGGTTCGCAATCTGAGGTGGACAACAATGTGAGCATCCAGATCG
CAACGGATGCCTATCTGCTGAACAATACGGACAAGGTGAGGACCAAGTCC
AAACCGGTGCGCTGTACGCCCAGATCCAGCGGCACCTTTGGCATCGACAA
GCGACTGTCCAAGTTCAATGTGAGCGAGACGAAACCTCGGACGAGTCCGG
AATGGGAGCTCCGGCAGAGAGAGAAGGCACGAGAAGCGGAGCGCCAACAA
AAACGGGAGCGGGATCGACAGTTGTTGGAGGACCGACGCTTGGAGCAGGA
GAGGGAACTTCAGGAGGAGCGAGAGCGTGCCCGCCAGCGGGAGCGAGATC
GTGAGCAGCTCCGCCAGTTGGAGCGCATGCGAGATGAGGAGCGACTCCTA
GAGTTGGAAGTGGAGCGCGAGAGGCAGCGATTGCGGGAACTAGAGCGGGA
AAACCAGCGGCACAGAGAATACGAGCGGCTGTGTGCCCTCCAGGAGCAGG
CGCGTCGGGAGCAAATGGATCTACTGTGCCAAGAGAACATACCTCCCCGA
CCGTCAGTTCCAATGACCTCGCACTTGTACACAACCACCTCTGATGATCG
TTTGCCCGGAATGGCCTTTTGTGATCTATCGTCCCGAAGGTCACGTCGAT
TGGAGAATCCGACCAGACCGAAAGAAAGACGGAAGACTAGAGTATGTCAG
GATCCTAGAAGTGTCTCGTCCGCTACCCGTTCACTTACTCCCCCGCCGAT
CCTTACCCGGAATAGCAGCTCCCCATCACCCTCTTCAGAAGCGCCGTCTT
CTACACCCACCTCCCGTTCCTCATCTCCAAATCGCAGGTCAAACCGCTGC
TTCAGTTCAACACCTAATCCCGATTCCCAACGATTCCCTCCTACAATTCC
AAGAGATCTAGTTCGCAGTAGTTCGGGAACTTCGAATGGCAATGTCCATG
TCACAGTGACCACCACCGGGCGACGGAGCAACTGCAGCATGAGGCGTTCA
TCCAATGACCGGGCTAGTGAGCAAAAGCAGCTAAATGGAAACCAAACCTG
CGTCGCCTGTCTGAATAATATGCCCATTAGGATAACCACATCTCGGTCCA
GGGATACGGATCTAGCCTTCAGTCTGAACCATGTGAGGATGAGGGGATCA
TCACCAGCGCCCACGGAAAGGAGCAGCAGTCAGGAAAGCCAAGATTCCTG
TCAGGTTAACATCAGCGTGTATGCGGATAAACTGCGTTTGATGCGTTTAG
CAAGCTTTCTAGACCAT
BO27124.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:06:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13330-RA | 1836 | CG13330-PA | 1..1833 | 17..1849 | 9165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13330-RA | 2129 | CG13330-RA | 78..1910 | 17..1849 | 9165 | 100 | Plus |
Vmat-RE | 7325 | CG33528-RE | 3224..5040 | 1849..33 | 9085 | 100 | Minus |
Vmat-RF | 7141 | CG33528-RF | 3040..4856 | 1849..33 | 9085 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13515417..13517233 | 33..1849 | 9085 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:06:32 has no hits.
BO27124.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-15 09:23:13 Download gff for
BO27124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13330-RA | 78..1910 | 17..1851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:29:02 Download gff for
BO27124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13330-RA | 78..1910 | 17..1851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:41 Download gff for
BO27124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13330-RA | 78..1910 | 17..1851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:41 Download gff for
BO27124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13515336..13515351 | 17..32 | 100 | -> | Plus |
2R | 13515417..13517233 | 33..1851 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:29:02 Download gff for
BO27124.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9402841..9402856 | 17..32 | 100 | -> | Plus |
arm_2R | 9402922..9404738 | 33..1851 | 99 | | Plus |
BO27124.pep Sequence
Translation from 16 to 1867
> BO27124.pep
MNRISNPSRRQASDVFIGDPFKIHSYNFRYADKPFYPVQNYQRPPAAPTP
PALVKKASFQTFYHNPRFSQDPEYIPAKKSPQTSSYRRRLLLESMDMPLG
STVTTPERQSVPVAPQTKRSPTATDSPLLRTCCQSVRYEAMRRGPSNTTL
CQSTTNLIRSAGGGVPSTSTTTFSMDSNAHLQNRRSGCGISIDICSVGSQ
SEVDNNVSIQIATDAYLLNNTDKVRTKSKPVRCTPRSSGTFGIDKRLSKF
NVSETKPRTSPEWELRQREKAREAERQQKRERDRQLLEDRRLEQERELQE
ERERARQRERDREQLRQLERMRDEERLLELEVERERQRLRELERENQRHR
EYERLCALQEQARREQMDLLCQENIPPRPSVPMTSHLYTTTSDDRLPGMA
FCDLSSRRSRRLENPTRPKERRKTRVCQDPRSVSSATRSLTPPPILTRNS
SSPSPSSEAPSSTPTSRSSSPNRRSNRCFSSTPNPDSQRFPPTIPRDLVR
SSSGTSNGNVHVTVTTTGRRSNCSMRRSSNDRASEQKQLNGNQTCVACLN
NMPIRITTSRSRDTDLAFSLNHVRMRGSSPAPTERSSSQESQDSCQVNIS
VYADKLRLMRLASFLDH
BO27124.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:37:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13330-PA | 611 | CG13330-PA | 1..611 | 1..611 | 3161 | 100 | Plus |
CG2839-PA | 826 | CG2839-PA | 269..388 | 245..366 | 203 | 35.2 | Plus |
CG2839-PA | 826 | CG2839-PA | 559..661 | 264..366 | 201 | 39.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 533..655 | 244..366 | 198 | 34.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 565..667 | 264..366 | 197 | 38.8 | Plus |
CG7971-PG | 1062 | CG7971-PG | 491..792 | 253..594 | 197 | 25.4 | Plus |
CG7971-PA | 1062 | CG7971-PA | 491..792 | 253..594 | 197 | 25.4 | Plus |
CG7971-PC | 1107 | CG7971-PC | 491..792 | 253..594 | 197 | 25.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 310..410 | 264..366 | 196 | 41.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 577..679 | 264..366 | 193 | 37.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 583..685 | 264..366 | 193 | 37.9 | Plus |
CG7971-PG | 1062 | CG7971-PG | 392..760 | 255..592 | 192 | 23.9 | Plus |
CG7971-PA | 1062 | CG7971-PA | 392..760 | 255..592 | 192 | 23.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 571..673 | 264..366 | 191 | 36.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 595..697 | 264..366 | 186 | 35 | Plus |
CG2839-PA | 826 | CG2839-PA | 601..703 | 264..366 | 186 | 35.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 316..416 | 264..366 | 184 | 36.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 589..691 | 264..366 | 184 | 35 | Plus |
CG2839-PA | 826 | CG2839-PA | 274..399 | 243..366 | 183 | 34.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 531..631 | 264..366 | 182 | 38.8 | Plus |
CG2839-PA | 826 | CG2839-PA | 613..715 | 264..366 | 181 | 34 | Plus |
CG2839-PA | 826 | CG2839-PA | 304..404 | 264..366 | 180 | 35.9 | Plus |
CG2839-PA | 826 | CG2839-PA | 485..625 | 244..366 | 177 | 33.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 607..708 | 264..365 | 174 | 32.4 | Plus |
CG2839-PA | 826 | CG2839-PA | 474..589 | 258..366 | 170 | 37.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 643..750 | 264..371 | 169 | 29.6 | Plus |
CG2839-PA | 826 | CG2839-PA | 444..554 | 253..366 | 168 | 33.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 615..721 | 258..366 | 168 | 32.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 631..733 | 264..366 | 167 | 30.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 637..748 | 264..373 | 167 | 33 | Plus |
CG2839-PA | 826 | CG2839-PA | 625..727 | 264..366 | 166 | 30.1 | Plus |
CG2839-PA | 826 | CG2839-PA | 328..427 | 264..366 | 165 | 34 | Plus |
CG2839-PA | 826 | CG2839-PA | 352..466 | 264..366 | 161 | 38.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 346..455 | 264..373 | 159 | 33.3 | Plus |
CG2839-PA | 826 | CG2839-PA | 318..421 | 258..366 | 158 | 32.1 | Plus |