Clone BO27125 Report

Search the DGRC for BO27125

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG33230-RA
Protein status:BO27125.pep: Imported from assembly
Sequenced Size:1372

Clone Sequence Records

BO27125.complete Sequence

1372 bp assembled on 2010-09-17

GenBank Submission: KX800026

> BO27125.complete
GAAGTTATCAGTCGACATGGGTCGCACGCAGCGTCGCCGGCATCAGAGGG
CCAAGAAGTCTGACGAGAATTCGGGCTCCCTGCACGACCTCTACGTTCAT
CTACACTCCGTTGGCTGGCAGAACCACACTCACTTGTCGGCCCAATACTA
CGAACAGACAGGTCGAGGACTATGCTCTAAACAGAAGACCTTTTCTCCGG
AGGATGAGCTCATTCGCCTGCCCATTGGCTGTCTCATAAGCATAGCGACT
CTGGAATCTGATGGGCCATTCAAAAGTCTTTTCGACGAAGAGTTATTTGA
CAAGGACTCCAGAATTTCCTTTCAGGCACTGATAGCCTGTTATATTTTGT
ACCACAAGCACTTGCAGGAGTGTACGCTAGGGACTCACTCCTCTACTTAC
GCTGCATATTTGGACACCCTGCCCAGGTGCTACTCCACTCCGTATTTCTG
CTCCATACCCGAGCTACAGTGTCTGCCAGAATCCCTGCTAGAGCGGACCG
TGGCCCAGAACCGTCAGATAAGAGGTTACTTTGAAATTATTAAGAACATT
GTACACAAATGCGATTGCTGTGGGAAGAGCTACGGCCAGGAGATTTGGAC
ACTCGCAGACTTTAAGTGGGCCTACTTCAGCGTGAACACTAGGAGCGTCC
ACCTCAGTTCCCGCTTTCTGAAAAAGCAGAGCAACTACTTTCAGCCGCTT
ATCAGTGGCGACACCAACCTGGCATTGGCTCCGTTTCTGGATCTTTTTAA
CCACTCAGATCAAGTGGAAATCACAGCAGGGATTGAGGGTCCCGATTACG
TTCTTACATTGAAATCTCTGCCATTTTCCGAGACCAAACCATATGATCAA
TTGTTCATCAGCTACGGTGCTTTGCCCAACTTTAAGCTATTGACGGAATA
TGGCTTTTGGCTAAGAGAAAATAAGCACGATTACTTTGAAGTCTCCCTAC
TGGACATTGAGCACATGATTAAGCAAAACAAGGAGCTATCAACGCAAACC
TTTCACCGGAACATCTTTAAATTCATCAGGGAGCACAATCTGAACGATCA
AATGTTCGTGCACATCGACGATGGATGCTCTCACAATCTAAGGGTTGTGC
TGCACCTGATCTTCAAGCAGCAGGCCTACTTTCCCAACATCCTCAACCAG
ATTGCCTTTGGAGACGCCGAGCAGTTTCAGGACGTGCAGCCAGAGCTGTC
GTACCTCGTAGAATATAAAATAAAGGAATACGAGATCTTTGGAGGAGAGC
TGGATAAGCTTCCTAAATTGACAGAAAGTGGTGCAGTGGCACGGTCTTAC
CTCCAAGAGTGTATCCGTTACCTCGTTGACTTTCAATCGGTGCATCTAGC
TGCAGCAAGCTTTCTAGACCAT

BO27125.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG33230-RA 1341 CG33230-PA 1..1338 17..1354 6690 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG33230-RA 1754 CG33230-RA 275..1612 17..1354 6690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1618918..1620255 17..1354 6690 100 Plus
Blast to na_te.dros performed on 2014-11-28 05:46:22 has no hits.

BO27125.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-20 11:04:50 Download gff for BO27125.complete
Subject Subject Range Query Range Percent Splice Strand
CG33230-RA 297..1634 17..1356 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:00 Download gff for BO27125.complete
Subject Subject Range Query Range Percent Splice Strand
CG33230-RA 275..1612 17..1356 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:59 Download gff for BO27125.complete
Subject Subject Range Query Range Percent Splice Strand
CG33230-RA 275..1612 17..1356 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:59 Download gff for BO27125.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1618918..1620255 17..1356 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:00 Download gff for BO27125.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1618918..1620255 17..1356 99   Plus

BO27125.pep Sequence

Translation from 16 to 1372

> BO27125.pep
MGRTQRRRHQRAKKSDENSGSLHDLYVHLHSVGWQNHTHLSAQYYEQTGR
GLCSKQKTFSPEDELIRLPIGCLISIATLESDGPFKSLFDEELFDKDSRI
SFQALIACYILYHKHLQECTLGTHSSTYAAYLDTLPRCYSTPYFCSIPEL
QCLPESLLERTVAQNRQIRGYFEIIKNIVHKCDCCGKSYGQEIWTLADFK
WAYFSVNTRSVHLSSRFLKKQSNYFQPLISGDTNLALAPFLDLFNHSDQV
EITAGIEGPDYVLTLKSLPFSETKPYDQLFISYGALPNFKLLTEYGFWLR
ENKHDYFEVSLLDIEHMIKQNKELSTQTFHRNIFKFIREHNLNDQMFVHI
DDGCSHNLRVVLHLIFKQQAYFPNILNQIAFGDAEQFQDVQPELSYLVEY
KIKEYEIFGGELDKLPKLTESGAVARSYLQECIRYLVDFQSVHLAAASFL
DH

BO27125.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG33230-PA 446 CG33230-PA 1..446 1..446 2378 100 Plus