BO27126.complete Sequence
2422 bp assembled on 2010-10-26
GenBank Submission: KX793888
> BO27126.complete
GAAGTTATCAGTCGACATGAATTCCTGCTGCTGTAGATCGCATAGCGATC
GCACGAACCCGATGGCCTGTCTTCCTCAGTTTCCACGTCTGCAGCGTGTC
CAAAGTTGTCGGCCATTTTTGGAGGGACGAAAGGCAGCCAGCTGTTGTGT
TTCGGGCGAGAGGCGATGGGGTCAGAGAAACGGTTGTATGATCCAGGTGC
TGGCCAAGATGGTCAATAAGTCGTCCAGTACGGTCTGCCAATTTCTACAC
CAATTGACACTGCAGGTCTTTGCGAGAATTCTATATCCTTTGATGTTAGG
CTGGAATACGCTGAAGGTACCGTTTGTTATACCCGACATCTGTGAGCTAT
ACTACGGGATATTCGACGAATGTGGTAACATAAGGGGTTCCATACCAACA
AGGACGTTGCTCATCCTCATATCCATGATCCAGTATTTTCTCAATCTACC
GAAGAGATGTGGACAAAATAGCGCTTGTTCGGGATGCAGAAGCCAGACGG
ATGATTTGAGGAACATTCACAGTCCCGGTTATTGTGGCAAAAATGCCATG
ACGCCATTCTCGGGACGGGGGATTACGGAAAAAGGACCATCGAAGGGAAG
TGATGTGTGGGCGGGACTTAAGCGATTGGGATACGAAAGACGTGGCGATC
TAGATAGTTATCCCTCGGATGAGTCTATACCATATGGCTATGCACCCCAT
CGATGTCCTTGCCAGGCCGGAAGTCCCAGAATCCAGAGATCCGGAATTTT
GAACCCGTATGCAAATAGGCCTGGGGCCATGAGATCGTTGGTCTGCGCAG
AGGAACTGGAAAGTTCCATGTTAGATTCCGACTATAATCAGCAAATTCCA
ATGGCACCCATTTCACCAAAAGCAGCTCAAATTATTCACATTAATCACAT
CTCGAATCTATATGCTGCAGTCGTACAAAACCAACATACAAGACAATTAT
TTGCTGATGGAAGGCCACCAAGGCCGCGGGTAAGACCCTGTACTGAGAAC
CAAAACAGATTCTCCGGTGGTTTCATGATGCCCGAACCATATTTCAATGG
TATGCCATGGAGTTGGCTGCACAGAGATCCTCAGAGAATGATACGTCTAC
CAAGTGGTGGTCTTCCTTTGGAAATACCGCGTTACAGACGACAACCTTTG
GATGAAGAGTACCACAGTTTTAAAAGTAAATATGAACACTTGAGCAGACG
GGATAACCCCTTCAAAGGAAGTAGTCTATTGCCTTTAGACACTTACCCAT
CTGAGAATAGATTTAACCAAGGAAATAGGTTGCAATCTATAAGTTGGGAG
AAAAAAATACTGGATCATCAAAATCAGCCTACAAAAAATATTTCCAATAA
TCTAATAATCCCAATTAAACAACAAAGAAAACTTGAGTGGGAGCAGCTCT
TTATAAAAAGAATTAATGATGCAAAGAAAACTAAGGGAACTTTTGATTTC
TGGAATGAGATGATAGAGAGAAATAAGTTCAAAGCATTTCAGCAAGCAAT
AAAGGACACCAAACCAGTATTCCCTTCAAAAGAGATTGGGTATTCTCAAT
CAAGGAAAGATAGTGCCCACATTATAACGAAGAGAAGCAATAATTCCTTG
CGATCGGCGAGGCAAAACCAAAAGAAATTGGAAATCGAAAAACCTGAAAT
TTCGAAAAGGTCAAATAATAATCGAACTCATGTTTCAGCACAACATCGAG
TGAAACAACTTTGTAGTAGCCAAGAAAAGCAGACTTTAAAAAATCAAATT
CAACAAGATACCTATAAAATTAAATCTGTAAATAACACTCCGCATTTGGC
AAAGAATGAAATAATTCCTCAACCAAAATATCCTGATCCCGAAGATTATA
GAAAAGAACGGGCTAGAAATCTAAAATTTAATAGAAAAACTGCCGGAGAA
TCCGTAATGCTAATAAAGCCTGCAAAAAGTATCATAAAGAAGCCTAAAGA
GACTCAGTTAAAGGACGTAAGCCAGGATGAGTTGGAAAGTTTAAAGAAAC
AATTAGAGATGAATACAAATAATAAAAGGGTACGATTTAGTGTACCCACA
CCTTACAGCAATGAAAGAGTGATGCCAGCAGAAAAATATGTTCTTCTTGA
AGCTGGAGATCAGATACCTAAGCACTTCAGTAAGCTTCATAGTCAAGATA
AAAGTGCTACAAAAAGTGTATTTAGCCGAAGATCGGGAAAGTCACCGGAA
CGAGGTTTTAGGAAAAAACGATTGCATTCAGAAGATGGTACCGAACTGCC
CACATATAGTAAACGAGCAGCGATGGGTTCTCAAAATAAATATTATGGAA
ATACCAAAGCAAAGCCAAACAAACCACACGGTAAAAGTTGTAAAATCATG
CCCAAAGTATTGTATTCCAGAGAGGAAACACTGAAGAAATTGAGTTATTT
GTTAGCAAGCTTTCTAGACCAT
BO27126.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:31:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4631-RA | 2391 | CG4631-PA | 1..2388 | 17..2404 | 11940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4631-RA | 2668 | CG4631-RA | 121..2508 | 17..2404 | 11940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16607490..16609877 | 17..2404 | 11940 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:31:19 has no hits.
BO27126.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-26 17:34:12 Download gff for
BO27126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4631-RA | 68..2455 | 17..2406 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:32:32 Download gff for
BO27126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4631-RA | 121..2508 | 17..2406 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:53 Download gff for
BO27126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4631-RA | 121..2508 | 17..2406 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:53 Download gff for
BO27126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16607490..16609877 | 17..2406 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:32:32 Download gff for
BO27126.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16607490..16609877 | 17..2406 | 99 | | Plus |
BO27126.pep Sequence
Translation from 16 to 2422
> BO27126.pep
MNSCCCRSHSDRTNPMACLPQFPRLQRVQSCRPFLEGRKAASCCVSGERR
WGQRNGCMIQVLAKMVNKSSSTVCQFLHQLTLQVFARILYPLMLGWNTLK
VPFVIPDICELYYGIFDECGNIRGSIPTRTLLILISMIQYFLNLPKRCGQ
NSACSGCRSQTDDLRNIHSPGYCGKNAMTPFSGRGITEKGPSKGSDVWAG
LKRLGYERRGDLDSYPSDESIPYGYAPHRCPCQAGSPRIQRSGILNPYAN
RPGAMRSLVCAEELESSMLDSDYNQQIPMAPISPKAAQIIHINHISNLYA
AVVQNQHTRQLFADGRPPRPRVRPCTENQNRFSGGFMMPEPYFNGMPWSW
LHRDPQRMIRLPSGGLPLEIPRYRRQPLDEEYHSFKSKYEHLSRRDNPFK
GSSLLPLDTYPSENRFNQGNRLQSISWEKKILDHQNQPTKNISNNLIIPI
KQQRKLEWEQLFIKRINDAKKTKGTFDFWNEMIERNKFKAFQQAIKDTKP
VFPSKEIGYSQSRKDSAHIITKRSNNSLRSARQNQKKLEIEKPEISKRSN
NNRTHVSAQHRVKQLCSSQEKQTLKNQIQQDTYKIKSVNNTPHLAKNEII
PQPKYPDPEDYRKERARNLKFNRKTAGESVMLIKPAKSIIKKPKETQLKD
VSQDELESLKKQLEMNTNNKRVRFSVPTPYSNERVMPAEKYVLLEAGDQI
PKHFSKLHSQDKSATKSVFSRRSGKSPERGFRKKRLHSEDGTELPTYSKR
AAMGSQNKYYGNTKAKPNKPHGKSCKIMPKVLYSREETLKKLSYLLASFL
DH
BO27126.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:44:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4631-PA | 796 | CG4631-PA | 1..796 | 1..796 | 4244 | 100 | Plus |
| CG31815-PA | 443 | CG31815-PA | 31..133 | 42..143 | 163 | 36.9 | Plus |
