BO27127.complete Sequence
796 bp assembled on 2010-09-17
GenBank Submission: KX799069
> BO27127.complete
GAAGTTATCAGTCGACATGAGTCCGGTTCAGTCATATTCACACAGTCGAC
TACTCCTGCTCGTGGTCATCGTGACCTTGGGCGTGGTCCAATCCAGTCGA
CTGCCGGCGGAGGTGGGCTCCCAGCCACACAGCATCTCACTGCGTCGGAA
TGGCGTCCATGTGTGCGGAGGAGCTTTGATCCGTGAAAAGTGGATCCTCA
CCGCAGCCCATTGCGTCAGTTTGGGCGGTGGACAGCAGAGCTACCCAGCT
AAATCCTACAATGTGCGAGTGGGCAGCATTCAGCGACTGACCGGTGGTCA
ACTGGTGCCTCTGTCCAAGATCATAATCCACACGAACTACTCCAGTTCGG
ATGCAGTTGGCTCTAATGACTTGGCCTTGCTGGAGCTGGAAACGTCGGTG
GTCCTGAATGCGAATACGAATCCGATTGATTTGGCCACCGAGCGACCGGC
GGCGGGCTCCCAGATTATCTTCTCCGGCTGGGGATCCAGCCAGGTGGACG
GATCTCTCAGTCATGTCCTCCAGGTGGCCACCAGACAGAGCCTGAGTGCG
TCCGATTGCCAAACGGAGCTGTACCTGCAGCAGGAGGATCTGCTCTGTTT
GTCCCCGGTGGACGAGGACTTCGCCGGACTCTGTTCCGGTGATGCCGGAG
CTCCGGCGTCTTACAACAACCAATTGGTGGGCATTGCCGCCTTCTTTGTG
AGCGGATGTGGTTCCGAGCAGCCCGATGGCTACGTGGATGTGACCCAGCA
TCTGGAGTGGATTAACGAAAACGCTGTTGCAAGCTTTCTAGACCAT
BO27127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:46:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4653-RA | 765 | CG4653-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:46:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4653-RA | 895 | CG4653-RA | 7..769 | 16..778 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:46:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16704613..16705152 | 239..778 | 2700 | 100 | Plus |
X | 23542271 | X | 16704087..16704311 | 16..240 | 1125 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:46:02 has no hits.
BO27127.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-20 11:04:49 Download gff for
BO27127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4653-RA | 1..762 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:57 Download gff for
BO27127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4653-RA | 8..769 | 17..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:52 Download gff for
BO27127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4653-RA | 8..769 | 17..780 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:52 Download gff for
BO27127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16704088..16704311 | 17..240 | 100 | -> | Plus |
X | 16704615..16705152 | 241..780 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:57 Download gff for
BO27127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16598121..16598344 | 17..240 | 100 | -> | Plus |
arm_X | 16598648..16599185 | 241..780 | 99 | | Plus |
BO27127.pep Sequence
Translation from 16 to 796
> BO27127.pep
MSPVQSYSHSRLLLLVVIVTLGVVQSSRLPAEVGSQPHSISLRRNGVHVC
GGALIREKWILTAAHCVSLGGGQQSYPAKSYNVRVGSIQRLTGGQLVPLS
KIIIHTNYSSSDAVGSNDLALLELETSVVLNANTNPIDLATERPAAGSQI
IFSGWGSSQVDGSLSHVLQVATRQSLSASDCQTELYLQQEDLLCLSPVDE
DFAGLCSGDAGAPASYNNQLVGIAAFFVSGCGSEQPDGYVDVTQHLEWIN
ENAVASFLDH
BO27127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:31:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4653-PA | 254 | CG4653-PA | 1..254 | 1..254 | 1295 | 100 | Plus |
CG1304-PA | 260 | CG1304-PA | 44..257 | 37..253 | 433 | 40.9 | Plus |
Ser6-PA | 259 | CG2071-PA | 44..257 | 37..253 | 422 | 41.2 | Plus |
CG9676-PA | 251 | CG9676-PA | 34..249 | 31..253 | 413 | 40.3 | Plus |
CG32523-PA | 262 | CG32523-PA | 41..260 | 29..253 | 368 | 36.1 | Plus |