BO27129.complete Sequence
655 bp assembled on 2010-08-18
GenBank Submission: KX797782
> BO27129.complete
GAAGTTATCAGTCGACATGGAGAAGATCTGGAAGAAGGTGTGCGAGCACC
ACGATGTGCCCGAGCAGGTGGCCAACGAGTGGTTCGCCCGCATTCAGCAG
CACCTGAGCTCCGAGGATCCCGCTCGCGCCTACCACAATTGGGAGGAGAT
GATGCGGCGCAAGGAGCCGCACTTGGCGGGCGTGGCCAATCCCAACATTG
TGCTGGCCGCCTTCTTCCAGTACTACCACTTCGATGGTAACCGCAGCTGT
GCGGAGAAGAACTGCGAGGTCTTTGAGGAGTTTTGCAATGATGCCGTCAT
CGAGGATGACCATGCAAAAAGCCTGGTATGTAATTTGCTGGGGCGCAAGA
CCCCGGAGAACCAGTTGACCTGGTGCCATGACGACGAGGCCAACTTGCTG
CAGGACGTAGACCTGGTGGTCCTAGCTGCTTCGCCGGAGGAGTACAAGCA
CTATACAACTCTCCTTCGCTCGGAGTACGCCAATCTCGACGATGCCACCT
ACAAGGCCATGCGCATCAAGGTGCTGGAGACCCTGCTGATGATTCCCTCC
ATCTACGCCACTGGAGACTACCACGACAAGTACGAAGAGCTAGCCCGCGC
CAACATACGCAACGAGATCAGCGAGCTGAAGAAGCAGGCAAGCTTTCTAG
ACCAT
BO27129.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42361-RA | 624 | CG42361-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42361-RA | 1001 | CG42361-RA | 122..742 | 17..637 | 3105 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24607794..24608085 | 17..308 | 1460 | 100 | Plus |
| 2R | 25286936 | 2R | 24608319..24608529 | 427..637 | 1055 | 100 | Plus |
| 2R | 25286936 | 2R | 24608143..24608261 | 308..426 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:43:44 has no hits.
BO27129.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:30 Download gff for
BO27129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42361-RA | 102..722 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:35 Download gff for
BO27129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42361-RA | 122..742 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:13 Download gff for
BO27129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42361-RA | 122..742 | 17..639 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:13 Download gff for
BO27129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24607794..24608084 | 17..307 | 100 | -> | Plus |
| 2R | 24608143..24608261 | 308..426 | 100 | -> | Plus |
| 2R | 24608319..24608529 | 427..639 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:35 Download gff for
BO27129.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20495317..20495607 | 17..307 | 100 | -> | Plus |
| arm_2R | 20495666..20495784 | 308..426 | 100 | -> | Plus |
| arm_2R | 20495842..20496052 | 427..639 | 99 | | Plus |
BO27129.pep Sequence
Translation from 16 to 655
> BO27129.pep
MEKIWKKVCEHHDVPEQVANEWFARIQQHLSSEDPARAYHNWEEMMRRKE
PHLAGVANPNIVLAAFFQYYHFDGNRSCAEKNCEVFEEFCNDAVIEDDHA
KSLVCNLLGRKTPENQLTWCHDDEANLLQDVDLVVLAASPEEYKHYTTLL
RSEYANLDDATYKAMRIKVLETLLMIPSIYATGDYHDKYEELARANIRNE
ISELKKQASFLDH
BO27129.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:24:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42361-PA | 207 | CG3579-PA | 1..207 | 1..207 | 1116 | 100 | Plus |
