BO27132.complete Sequence
976 bp assembled on 2010-09-17
GenBank Submission: KX797896
> BO27132.complete
GAAGTTATCAGTCGACATGGGACTCTCGAAGATCTGGCTTCTGGTGAGTT
GTCTGCTGTGGACCTGCCTGCCCCAGAGCCAGGGAACGGTGTATCCGAGG
GACATCCTTCTAAAGACTCCGAAATTTCGACGCGTCTGGGGCGGGGTGCA
GTCCAACACAGGCCCGAATTTCGGAGGCTGGCTGTTGCGGATCCTGAACG
GTGACGGTAACTTTGCCTGCGGAGCTGCCTACTATGCCCCTCTGCTCGTG
ATCACCTCGGCCAACTGCATCTATCCGTATCGGAACAGCCTTGAAGGTGC
CACGGTGGAGGGCACCGCGTTCTCCGAATGCGATAGGGAGAACTATGCTG
ATATCGATACGATTCAATTTCCCGAGAAATTTATCTACCAGAAACTCTAC
ATGGACGTGGCAGTAGTGCGTCTAAGGGATCCCGTTAGGGGACGGCTCAC
TGAGTTCATCCGTCTTTGCAGCGTCAAAGTGCAGCCCAAAATGCAGATGG
TGGTCTTCGGATGGGGTTTCGACAATACGGAGGTGGAGATACCCTCATCG
GATCCCCGAAACGTTACAGTAACTATTATATCCATTAAGGAGTGCCGTCA
AAAATTCAAAAGCCCAAAGATAGCGAGCACATCGATCTGCGCCAGGCAGC
CCAAGAATCCGAAGCAGTGCCTCTACGACGGAGGAAGCCCCCTGATTTAC
GGAAGAGAGCTCTGCGGCGTCGTGTCCTTCGGGTCACACTGCATCGACAC
CTCTAGGCCCGGCATGTACACCAACATCAGAAGAGTAAAACGATTCATTA
CTGAAACGGAAGAATCCATAAATGCCGGTGATGTCTTCAGATCAACTAAA
GTAGTGAAAGAAACAAAGAAACCCCCAAAGAAAACAATCAAACCAAAATC
GAAACCAGTAAAGATACAACGTCTTTTAAGAACTGTAATGGTGGAGCCCT
TGGTGTGTGCAAGCTTTCTAGACCAT
BO27132.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:44:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34129-RA | 945 | CG34129-PA | 1..942 | 17..958 | 4710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:44:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34129-RA | 972 | CG34129-RA | 6..947 | 17..958 | 4710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:44:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26190259..26191200 | 958..17 | 4710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:44:50 has no hits.
BO27132.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-20 11:04:47 Download gff for
BO27132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 3..944 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:49 Download gff for
BO27132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 6..947 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:28 Download gff for
BO27132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34129-RA | 6..947 | 17..960 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:28 Download gff for
BO27132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26190256..26191200 | 17..960 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:49 Download gff for
BO27132.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22015978..22016922 | 17..960 | 99 | | Minus |
BO27132.pep Sequence
Translation from 16 to 976
> BO27132.pep
MGLSKIWLLVSCLLWTCLPQSQGTVYPRDILLKTPKFRRVWGGVQSNTGP
NFGGWLLRILNGDGNFACGAAYYAPLLVITSANCIYPYRNSLEGATVEGT
AFSECDRENYADIDTIQFPEKFIYQKLYMDVAVVRLRDPVRGRLTEFIRL
CSVKVQPKMQMVVFGWGFDNTEVEIPSSDPRNVTVTIISIKECRQKFKSP
KIASTSICARQPKNPKQCLYDGGSPLIYGRELCGVVSFGSHCIDTSRPGM
YTNIRRVKRFITETEESINAGDVFRSTKVVKETKKPPKKTIKPKSKPVKI
QRLLRTVMVEPLVCASFLDH
BO27132.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34129-PA | 314 | CG34129-PA | 1..314 | 1..314 | 1668 | 100 | Plus |
| CG11037-PA | 292 | CG11037-PA | 52..287 | 30..270 | 315 | 33.7 | Plus |
| Sems-PA | 275 | CG10586-PA | 43..265 | 39..263 | 299 | 33.8 | Plus |
| CG34130-PA | 297 | CG34130-PA | 45..263 | 43..261 | 287 | 28.6 | Plus |
| CG10587-PA | 276 | CG10587-PA | 36..268 | 31..264 | 280 | 30.5 | Plus |
