BO27135.complete Sequence
1129 bp assembled on 2010-09-17
GenBank Submission: KX799231
> BO27135.complete
GAAGTTATCAGTCGACATGCTTTTGGCCCGTTTAAACCATGTGCTGTCAG
GACGACCGATGCGCCTTTTGGGCCAGTCTGGATGTCCTCGCCTGTGGAGC
TCAGCCCATGCGCAGATGAACAGTAATTCCTTAAGAACACCTTCCTTGGC
TCAAGGAAAGTCAGTGATTCCTAAAAGGAATATGCAAGAACTTGGGATGA
GAAAGTATTCCAGGGAGTCGAGAGATCGCGATCGTTCCCAACTGGAGAGT
CGAACCAGAGGTCCTTCCCTCAAGGAGCGCATGATGGGACCCCCCAGTGA
AAATGCTTACTCCATGGGCAAGGGAGCGGCGGCTGGAGCGGCTCTGATGG
GTCTCGTGGGTCTGTGCTACTATGGTCTGGGCCTTGCCAATCAACCGAGT
ATCTACGACCACTCGATGGTGTGGCCCCAGTACGTGAGGGATCGTATTCA
TGCCACCTATGCCTATTTCGGAGCATCCTGTGGTGTAACAGCTGCTTCAG
CCGTTGCCTTTTTCCAATCGGATGCCATGATGGCTCTGATGACGCGTTCT
GGATGGGTTGCCTCATTGGTTACCCTGGGACTGGTAATGCTCAGTGGATC
CATTGCACAAGGCCTAGAATATCAGCCGGGATTCGGAGCCAAGCAGCTGG
CCTGGCTCGTCCACTGTGCCGTTCTGGGAGCTGTCCTGGCACCCATGTGC
CTCCTGGGTGGACCCATTTTGACCAAGGCCCTTTTGTACACCAGCGGAAT
CGTGGGTGCCCTGTCCACCGTGGCCGCTTGTGCCCCGAGCGAAAAGTTCC
TGCATATGGGCGGACCGCTGGCCATTGGATTGGGCGTGGTCTTCGCCTCC
TCGCTAGCCTCCATGTGGTTGCCGCCCACTACTGCAGTGGGGGCGGGACT
GGCCAGCATGTCGTTGTACGGCGGACTGATTCTGTTCAGCGGATTTCTTC
TGTACGATACCCAAAGGATCGTTAAGTCGGCGGAGTTGTATCCCCAGTAC
AGTAAATTCCCTTACGATCCAATTAATCATGCCCTGGCCATTTACATGGA
TGCGCTCAACATCTTTATCCGCATCGCAATTATATTGGCTGGAGACCAAA
AGAGGAAGAACGCAAGCTTTCTAGACCAT
BO27135.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:48:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1287-RA | 1098 | CG1287-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
CG2076-RB | 1026 | CG2076-PB | 538..991 | 623..1076 | 545 | 74.7 | Plus |
CG2076-RA | 1026 | CG2076-PA | 538..991 | 623..1076 | 545 | 74.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:48:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1287-RA | 1426 | CG1287-RA | 129..1228 | 12..1111 | 5485 | 99.9 | Plus |
CG2076-RB | 1491 | CG2076-RB | 907..1360 | 623..1076 | 545 | 74.7 | Plus |
CG2076-RA | 1319 | CG2076-RA | 735..1188 | 623..1076 | 545 | 74.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:48:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7501149..7502248 | 1111..12 | 5485 | 99.9 | Minus |
X | 23542271 | X | 11091354..11091610 | 623..879 | 505 | 79.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:48:03 has no hits.
BO27135.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-20 11:04:52 Download gff for
BO27135.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1287-RA | 134..1228 | 17..1113 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:08 Download gff for
BO27135.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1287-RA | 134..1228 | 17..1113 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:18:36 Download gff for
BO27135.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1287-RA | 134..1228 | 17..1113 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:18:36 Download gff for
BO27135.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7501146..7502243 | 17..1113 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:08 Download gff for
BO27135.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3326868..3327965 | 17..1113 | 99 | | Minus |
BO27135.pep Sequence
Translation from 16 to 1129
> BO27135.pep
MLLARLNHVLSGRPMRLLGQSGCPRLWSSAHAQMNSNSLRTPSLAQGKSV
IPKRNMQELGMRKYSRESRDRDRSQLESRTRGPSLKERMMGPPSENAYSM
GKGAAAGAALMGLVGLCYYGLGLANQPSIYDHSMVWPQYVRDRIHATYAY
FGASCGVTAASAVAFFQSDAMMALMTRSGWVASLVTLGLVMLSGSIAQGL
EYQPGFGAKQLAWLVHCAVLGAVLAPMCLLGGPILTKALLYTSGIVGALS
TVAACAPSEKFLHMGGPLAIGLGVVFASSLASMWLPPTTAVGAGLASMSL
YGGLILFSGFLLYDTQRIVKSAELYPQYSKFPYDPINHALAIYMDALNIF
IRIAIILAGDQKRKNASFLDH
BO27135.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:31:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1287-PA | 365 | CG1287-PA | 1..365 | 1..365 | 1873 | 100 | Plus |
CG2076-PB | 341 | CG2076-PB | 34..341 | 55..364 | 1089 | 67.1 | Plus |
CG2076-PA | 341 | CG2076-PA | 34..341 | 55..364 | 1089 | 67.1 | Plus |