Clone BO27137 Report

Search the DGRC for BO27137

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG13510-RA
Protein status:BO27137.pep: Imported from assembly
Sequenced Size:421

Clone Sequence Records

BO27137.complete Sequence

421 bp assembled on 2010-08-18

GenBank Submission: KX795481

> BO27137.complete
GAAGTTATCAGTCGACATGGACAGCAAGCAGCCTCCACCGTACAGTGAAC
AGTCCGGATACACTCCCGCACAAACCTATCAGCCCGGTGGCCCCACCCAG
CCACCACTGTACCCACCGATGCCGCAGCCACCGCAGTCCTCAACGGTGAT
CATCCAGACCACCACAACCTCCAACCTGGTGCCCATCGGCAGTGGACCCA
CCCGCATCCGCTGTCCCTCCTGTCACGCCGAAGTACTGACCACCGTGAAG
TCCACTCCTTCCGGCAGGACGCACTGCTGGGCCCTCATCCTGTGCCTGTT
CATCTGCTGGCCGTGCGTATGCCTACCTTACTGCATGGACTCCTGCCAGA
ATGCCAACCACTACTGCCCCAACTGCAGCGCCTACATCGGCACCTACGAG
AACGCAAGCTTTCTAGACCAT

BO27137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG13510-RC 390 CG13510-PC 1..387 17..403 1935 100 Plus
CG13510-RB 390 CG13510-PB 1..387 17..403 1935 100 Plus
CG13510-RA 390 CG13510-PA 1..387 17..403 1935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG42565-RB 2577 CG42565-RB 89..475 17..403 1935 100 Plus
CG13511-RB 2577 CG13511-RB 89..475 17..403 1935 100 Plus
CG13510-RC 2577 CG13510-RC 89..475 17..403 1935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22657989..22658275 17..303 1435 100 Plus
2R 25286936 2R 22658923..22659022 304..403 500 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:43:38 has no hits.

BO27137.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:28 Download gff for BO27137.complete
Subject Subject Range Query Range Percent Splice Strand
CG13510-RA 85..471 17..405 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:33 Download gff for BO27137.complete
Subject Subject Range Query Range Percent Splice Strand
CG13510-RA 89..475 17..405 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:12 Download gff for BO27137.complete
Subject Subject Range Query Range Percent Splice Strand
CG13510-RC 89..475 17..405 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:12 Download gff for BO27137.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22657989..22658275 17..303 100 -> Plus
2R 22658923..22659022 304..405 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:33 Download gff for BO27137.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18546428..18546527 304..405 98   Plus
arm_2R 18545494..18545780 17..303 100 -> Plus

BO27137.pep Sequence

Translation from 16 to 421

> BO27137.pep
MDSKQPPPYSEQSGYTPAQTYQPGGPTQPPLYPPMPQPPQSSTVIIQTTT
TSNLVPIGSGPTRIRCPSCHAEVLTTVKSTPSGRTHCWALILCLFICWPC
VCLPYCMDSCQNANHYCPNCSAYIGTYENASFLDH

BO27137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13510-PC 129 CG13510-PC 1..129 1..129 745 100 Plus
CG13510-PB 129 CG13510-PB 1..129 1..129 745 100 Plus
CG13510-PA 129 CG13510-PA 1..129 1..129 745 100 Plus
CG30273-PB 128 CG30273-PB 16..127 4..129 263 41.3 Plus
CG30269-PB 144 CG30269-PB 33..142 7..128 254 41.8 Plus