BO27139.complete Sequence
1168 bp assembled on 2010-09-17
GenBank Submission: KX797382
> BO27139.complete
GAAGTTATCAGTCGACATGACGCAATGGTGTGCTATCAGTGTAATGAAGG
CCGTGCTCTGCGTCGGCTGCACGGAGGTGGACTACGTGACCACCATGGAT
AAGGTCGACTTCCAGTGCGACAGGTGCAGCACCCAGAATGGAATGCTTCA
GCGCAGCGGAAGATCCTCGAATGTTAGTACGGCCCTGCGTCTGTTGGGCG
CCAATGTGGAGTTGTTCGGTGTGCTCACCCGTAATCCCACCTATCGCATG
ATTCTGGATGATCTCGAGCAGCGGGGCATTGATATTAGCCATTGTACATT
CACGGACGCAAGTCCTCCCTTTTCCACAATTGTCCAAGATCGCTGGACGC
GTCGTTGCACGGTGGTGTATTGCGACAAGTCATTTCCATATGTTACGGCA
GCGGATTTCCGCAAATTGGATCTCGATCAATACGGCTGGGTGAATTTTGA
GGCACGGAGTCCACGTGAAACTTGCGATATGATACGCCTAATCCTCGATC
ACAACAACGGGCGGGATGAACGGGATCGGATAGTGGTATCGTTGCAGATT
TTCAATTCCTTCGAACAGGTCGTGCATCTGATTGCCATGTGCGACTATGT
GTTCGTCACCAAGTATATAGCCGAGTCCAGAGGCTGGAAGTCACCGCTGG
AAGCCTGCGAGGGTGTCAATGCGCTACTGCGCATGCCAAGGAACATTAGA
ATTCGCAGACCCTGCATCATTGTGCCGTGGAGCAGCCTGGGAGCAGGATG
TATGACCACGGAAGGGGAGTACTTCGAAGTGCCAGCACACAAGCCGAAAA
AGATCATCGATCGGGTGGGCGATAGTGATTGCTTCACGGCGGGCTTCATT
TATGCCGCTTTTGTGCGGCAAAGGCGATTGGCCGAAGCCGTGGACTTCGC
CAATGCTGTGGCCAGCTATAAGTTGGGCTATGTGGGTTTCGATTGCCTGG
GTCATTTGCCAATCGATGCGGTTAAGCTGCCCGTTAGAATGAGGTGTGGC
AGTGAGGTGTCCTCCGACGATGAGGATAACGGCGATCAGTTGAATAGCTG
CAAGAAGCACCTGTTACGCCCGATTGAGTTCCTGCCGGAAAAGTCCTCCA
TTGCACCCACTGAGAAGGAAGTTCCGATCGAGACTTCGCAACTTTCTAGC
GCAAGCTTTCTAGACCAT
BO27139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:43:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12289-RA | 1137 | CG12289-PA | 1..1134 | 17..1150 | 5670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12289-RA | 1395 | CG12289-RA | 179..1312 | 17..1150 | 5670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11457159..11458292 | 1150..17 | 5670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:43:38 has no hits.
BO27139.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-20 11:04:45 Download gff for
BO27139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 179..1312 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:38 Download gff for
BO27139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 179..1312 | 17..1152 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:17:02 Download gff for
BO27139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12289-RA | 179..1312 | 17..1152 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:17:02 Download gff for
BO27139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11457157..11458292 | 17..1152 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:38 Download gff for
BO27139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11450257..11451392 | 17..1152 | 99 | | Minus |
BO27139.pep Sequence
Translation from 16 to 1168
> BO27139.pep
MTQWCAISVMKAVLCVGCTEVDYVTTMDKVDFQCDRCSTQNGMLQRSGRS
SNVSTALRLLGANVELFGVLTRNPTYRMILDDLEQRGIDISHCTFTDASP
PFSTIVQDRWTRRCTVVYCDKSFPYVTAADFRKLDLDQYGWVNFEARSPR
ETCDMIRLILDHNNGRDERDRIVVSLQIFNSFEQVVHLIAMCDYVFVTKY
IAESRGWKSPLEACEGVNALLRMPRNIRIRRPCIIVPWSSLGAGCMTTEG
EYFEVPAHKPKKIIDRVGDSDCFTAGFIYAAFVRQRRLAEAVDFANAVAS
YKLGYVGFDCLGHLPIDAVKLPVRMRCGSEVSSDDEDNGDQLNSCKKHLL
RPIEFLPEKSSIAPTEKEVPIETSQLSSASFLDH
BO27139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:31:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12289-PA | 378 | CG12289-PA | 1..378 | 1..378 | 2005 | 100 | Plus |
| CG7328-PA | 306 | CG7328-PA | 4..304 | 10..316 | 633 | 42 | Plus |
| CG7551-PB | 322 | CG7551-PB | 15..316 | 11..314 | 572 | 36.2 | Plus |
| CG7335-PA | 372 | CG7335-PA | 33..367 | 13..319 | 321 | 27.1 | Plus |
