BO27145.complete Sequence
1489 bp assembled on 2010-09-20
GenBank Submission: KX796983
> BO27145.complete
GAAGTTATCAGTCGACATGACGGCCGAGACAAACAAAGGACCCGTTCTGG
GAATGAGGCATGTCCAGGCGCTACTGATCTTCCTCAATATAACTACCGTA
TTCATAGGCCGCCTAAATGTGGGCGTGTCTGTGGTGGCAATGACCAATGC
GGAAACCACGAACCCGAACTTTCCGGAATACGATTGGACGGAGGCAGAGA
AGTCGTACATTCTCTCCAGTTTCTTTTGGGGCTACATCCTAACGCAATTC
CTTGGAGGTTATCTCTGCAAGCGCTTTGGAGTCAAGAGTGTAATGTTTTG
GGGTGTCTTCGGATCTGGTGTCTGCAGTGCTTTGACGCCGCTGTTCATCG
GATTTGGAGAATGGCAGGCCTACTGTGGAATTCGAGTTCTAATGGGATTG
GCCCAGGGAGTGGTATTCCCCTGCATTCATCAGCACCTGGCTAAATGGTC
ACCGCCCGAGGAAAGAAATCGGTTGGGAGCTCTGAGTCACACTGGAATCG
AGTGCGGCAATGTGAGTGCCATGTTCCTGAGCGGAATGATAGCCAAGAGC
TCCCTGGGATGGCCCGGAATCTCATATGTCTCGGCTGGAGTGGCCTTCTT
CTGGTGTACATTATGGTTCGTCTTCGCTGCCAACCATCCTACGGAATCTC
GTTTCATAGGAGAGAACGAACTGATCTATATTGAGTCGTCTCTAAAGCAC
AATGAGTCATACCACGCTACCATTATACCCATTCCCTGGAAGGCAATTTG
GACGTCGGCACCATTCCTGGCCCTGCTCATAGTACGATGCGCTGAGAACT
GGGGACTGAGCACTCTGCAGGCCGAGATCCCATCCTATATGAACGGAGTC
CTCGACATGGACATGAAGAGCAATGCGTTCTTCTCGGCACTCCCATTCTT
GGCCATGTGGTGCATGTCGTATATTTACCTAGTCGTAGCCGATGTGCTCT
TGGGCAAGAACTCGGTGTCCTTGACGATTTTGAGAAAGACCTACAACTCC
ATTGCCTTCTGGATTCCTGCTGCCACTTTGGTGGGCATTGGCTTTTTGGA
CAAGGAACAAAAGAACTTCGCGATTGCTCTGATGACCATCAGTGTGGGCG
TGAATAGTGCTCAAACCATTGGCAGTGTTTTAAACACAATTGATCTATCG
AAAAATCACGCTAGCATTCTAATGGGAATTGTGAATACAGCGGCGAATTT
CGTGCCCATAGTCACTCCTTTAGTTGTTGGATGGATTGTTAAGGAAAATT
CTGATCGCTCCCAATGGCAGATCGTGTTCATCATTGCCTCCGTAATCTTC
TTTGTGGGCAATTGCATTTACTTGGTGTTTGGCACGGCCGAAACTCAGCC
CTGGGATGCCGAGGACTATCTGCAGACACAGAACCCGGAACTTGCCAATA
GACCACCTATGCAGGCGTTATCCTTTCCAATTAACGAAAATTCCAAAGAG
AAAATTAATAGTAAAAGCCATGCAAGCTTTCTAGACCAT
BO27145.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:40:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9825-RA | 1458 | CG9825-PA | 1..1455 | 17..1471 | 7275 | 100 | Plus |
| CG12490-RB | 1440 | CG12490-PB | 1..1271 | 17..1287 | 2650 | 80.6 | Plus |
| CG30265-RB | 1458 | CG30265-PB | 1..1352 | 17..1368 | 1660 | 74.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:40:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9825-RA | 1543 | CG9825-RA | 76..1530 | 17..1471 | 7275 | 100 | Plus |
| CG12490-RB | 1647 | CG12490-RB | 54..1324 | 17..1287 | 2650 | 80.6 | Plus |
| CG30265-RB | 1622 | CG30265-RB | 58..1409 | 17..1368 | 1660 | 74.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:40:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22837915..22838989 | 175..1249 | 5375 | 100 | Plus |
| 2R | 25286936 | 2R | 22835185..22836241 | 175..1231 | 1850 | 78.3 | Plus |
| 2R | 25286936 | 2R | 22833119..22834175 | 175..1231 | 1595 | 76.7 | Plus |
| 2R | 25286936 | 2R | 22839057..22839278 | 1250..1471 | 1110 | 100 | Plus |
| 2R | 25286936 | 2R | 22834990..22835129 | 37..176 | 700 | 100 | Plus |
| 2R | 25286936 | 2R | 22837720..22837859 | 37..176 | 700 | 100 | Plus |
| 2R | 25286936 | 2R | 22841605..22841790 | 725..910 | 315 | 78 | Plus |
| 2R | 25286936 | 2R | 5962261..5962374 | 946..833 | 195 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:40:47 has no hits.
BO27145.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:17 Download gff for
BO27145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9825-RA | 74..1528 | 17..1473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:45 Download gff for
BO27145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9825-RA | 76..1530 | 17..1473 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:36 Download gff for
BO27145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9825-RA | 76..1530 | 17..1473 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:36 Download gff for
BO27145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22837436..22837457 | 17..38 | 100 | -> | Plus |
| 2R | 22837722..22837858 | 39..175 | 100 | -> | Plus |
| 2R | 22837916..22838989 | 176..1249 | 100 | -> | Plus |
| 2R | 22839057..22839278 | 1250..1473 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:45 Download gff for
BO27145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18724959..18724980 | 17..38 | 100 | -> | Plus |
| arm_2R | 18725245..18725381 | 39..175 | 100 | -> | Plus |
| arm_2R | 18725439..18726512 | 176..1249 | 100 | -> | Plus |
| arm_2R | 18726580..18726801 | 1250..1473 | 99 | | Plus |
BO27145.pep Sequence
Translation from 16 to 1489
> BO27145.pep
MTAETNKGPVLGMRHVQALLIFLNITTVFIGRLNVGVSVVAMTNAETTNP
NFPEYDWTEAEKSYILSSFFWGYILTQFLGGYLCKRFGVKSVMFWGVFGS
GVCSALTPLFIGFGEWQAYCGIRVLMGLAQGVVFPCIHQHLAKWSPPEER
NRLGALSHTGIECGNVSAMFLSGMIAKSSLGWPGISYVSAGVAFFWCTLW
FVFAANHPTESRFIGENELIYIESSLKHNESYHATIIPIPWKAIWTSAPF
LALLIVRCAENWGLSTLQAEIPSYMNGVLDMDMKSNAFFSALPFLAMWCM
SYIYLVVADVLLGKNSVSLTILRKTYNSIAFWIPAATLVGIGFLDKEQKN
FAIALMTISVGVNSAQTIGSVLNTIDLSKNHASILMGIVNTAANFVPIVT
PLVVGWIVKENSDRSQWQIVFIIASVIFFVGNCIYLVFGTAETQPWDAED
YLQTQNPELANRPPMQALSFPINENSKEKINSKSHASFLDH
BO27145.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9825-PA | 485 | CG9825-PA | 1..485 | 1..485 | 2557 | 100 | Plus |
| CG12490-PB | 479 | CG12490-PB | 1..463 | 1..463 | 2064 | 82.5 | Plus |
| CG30265-PB | 485 | CG30265-PB | 1..485 | 1..485 | 1994 | 75.5 | Plus |
| CG30265-PA | 485 | CG30265-PA | 1..485 | 1..485 | 1994 | 75.5 | Plus |
| CG9826-PC | 495 | CG9826-PC | 1..464 | 1..464 | 1635 | 63.1 | Plus |
