Clone BO27149 Report

Search the DGRC for BO27149

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG13324-RA
Protein status:BO27149.pep: Imported from assembly
Sequenced Size:370

Clone Sequence Records

BO27149.complete Sequence

370 bp assembled on 2010-08-18

GenBank Submission: KX795032

> BO27149.complete
GAAGTTATCAGTCGACATGCGTCTTCTGCTCATCCTCTCAGTTGTCCTGG
CCGTGATCCTCGGCTGCCACGCCTACAGCGCCACCTGGGGGCGCAGGGTC
AACAACGATTTCCTCCTCTCACGCACCAGGGAAGTTCGCAATCCGATCAA
GAACAACTACTGGAACGTGAACGTGAACTACCCCAATGGATTCTACAACA
TCTCCGCCGTGATCGTGTACGACAACTTCAAGAACAACTCTGGAGCATCT
CCTAGCCTCTATTCCGGCGGTCCGGGCTACCGCTTTGCCACCGTGAATCT
TCGTGGTCAGGTGAACCGCGGAATCGACTCCACCGTCGAGATCTGGGGTC
GTGCAAGCTTTCTAGACCAT

BO27149.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG13324-RA 339 CG13324-PA 1..336 17..352 1680 100 Plus
CG13323-RB 339 CG13323-PB 1..336 17..352 1290 92.3 Plus
CG13323-RA 339 CG13323-PA 1..336 17..352 1290 92.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13324-RA 511 CG13324-RA 37..374 15..352 1690 100 Plus
CG13323-RB 2562 CG13323-RB 39..376 15..352 1300 92.3 Plus
CG13323-RA 521 CG13323-RA 39..376 15..352 1300 92.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13049283..13049620 352..15 1690 100 Minus
2R 25286936 2R 13046881..13047218 352..15 1300 92.3 Minus
Blast to na_te.dros performed on 2014-11-28 02:43:27 has no hits.

BO27149.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:22 Download gff for BO27149.complete
Subject Subject Range Query Range Percent Splice Strand
CG13324-RA 1..336 17..354 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:30 Download gff for BO27149.complete
Subject Subject Range Query Range Percent Splice Strand
CG13324-RA 20..355 17..354 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:10 Download gff for BO27149.complete
Subject Subject Range Query Range Percent Splice Strand
CG13324-RA 39..374 17..354 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:10 Download gff for BO27149.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13049281..13049618 17..354 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:30 Download gff for BO27149.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8936786..8937123 17..354 99   Minus

BO27149.pep Sequence

Translation from 16 to 370

> BO27149.pep
MRLLLILSVVLAVILGCHAYSATWGRRVNNDFLLSRTREVRNPIKNNYWN
VNVNYPNGFYNISAVIVYDNFKNNSGASPSLYSGGPGYRFATVNLRGQVN
RGIDSTVEIWGRASFLDH

BO27149.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG13324-PA 112 CG13324-PA 1..112 1..112 595 100 Plus
CG13323-PB 112 CG13323-PB 1..112 1..112 562 94.6 Plus
CG13323-PA 112 CG13323-PA 1..112 1..112 562 94.6 Plus
CG31789-PC 117 CG31789-PC 4..114 1..110 141 28.9 Plus
CG31789-PB 117 CG31789-PB 4..114 1..110 141 28.9 Plus