Clone BO27155 Report

Search the DGRC for BO27155

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG17122-RA
Protein status:BO27155.pep: Imported from assembly
Sequenced Size:1828

Clone Sequence Records

BO27155.complete Sequence

1828 bp assembled on 2010-10-15

GenBank Submission: KX794955

> BO27155.complete
GAAGTTATCAGTCGACATGCCGCCGAAAGTGAAGAAGGAGAAGAAGGATG
TGAACAAGGTGACCCAGGTGGACAGAACCTTCTACGAGCTGACCATCACG
GATCTCAACCAGAAACTAGCTCGACTGCGATCCCACGTGACCACCGTCGA
TGAGTCCAACATCACGCTGACCGAGAAACTCAAGGAAGTGGAGGCCGATG
GCGTCGACGTGGCCGCTCACTTGGAACGCACCCTGGCGGAGAGGAATAAC
TCGATCACCGAACTGGAGGAGCGCCTGGTAGAGATCACCAAGGTGCGGGA
TGTGGAGAACCGCGTGGCACAGGAGAAGATCGGCGACTTGGAGTCGAAAT
ACAAGGCCATGCACGACCAGTTGACCTCCGAAATAAAGCTGCTTAATGGC
AAGCTGAATTCCCTCGACGAGTTCCGCATCCAGAGGGATGTCCTGTTGGC
CAAGTTCGATGAGCAGGAGGCGGATCTCAATGAGCGCGAGAAGGATCACA
AGGAGGCGCTCTATAATATGGAACAACGAGCTGTGGTGGAGAAGGATGCG
CTAAAAAAGGAGGTCGAACAGAAGCTGCTGCAAGTTTCCGAGGACTTCAC
CCGGTCCAGTGAGATCCGCAACGCTGGCTACACCCGCCGCCTGATTCGTG
AGAACATAGCCCTGCAAAAGGAGATCGATCTACTGGTCATGTCCCAGATA
AAACTGCAGCAGGCATATACCAACCAGAAGTCCAAGCACAAGGAGATGGA
GGAGCAGTACAGTGCCCTCGATCAAATCAAAAACGAGCTGGTCCGCAACT
CCGTGAACAAGATCAAAATCATTGAGGGTCTGACCAGGAACTACGAGAAA
CTGAAAGCCAAGTACGTGGAGGTACTGCGCTACAAGAAGGCCTATGAATC
CCTTCTCCAAGCTGAAAAGTGCGAGAATGTCAAGCAAAAGGATGCGGCCG
GAAAACTCCGGACCCTGGCCAAGCGAATGGAGATTTTGGATCTGGACAAT
CGAAATCTGGAGGTGGTCCATGCCCAGCACGAGATCGAGATTACTCGACT
GCGTGGAGTCATTCAAGAGATCAAGTGCACTGTGCGGGATGCGATTGTGG
CGGAGCAGGCAGCCAAGAAATTCCCGGAGAGATTAGTCGAGGCCAATGTG
GATGATCCCGCAATGATAAATGAAGTTCGGGAGGAGGCCATATCCCTTTG
CAAGCTGAAACGCAGCGATTTGCTCTCCCAGCTTATGAGCATCGTGAGCT
CCCATTCGGAGGAGCTTCCGAAGACTCCATCGATTGCCTCCATTGTCAGT
GCCACCTCATCGCTGTATGCTCCAGGTAAAATGGGCTTCATGCCCACGAG
ACCCAAAGCAACGCCATTCGACGCCTTCCGCAGCGAGGTCATCGAACAGG
AGCCGGATCGCACCGTTCCGGAGGATCTGCAAAAGCAGAAGATGCAGGAT
CGGCTAATGACCTCGTTGCGAGGTGACGAGAATACCATAATCGATGTGGA
ATTCGGCACTACTCTATACGTTTCATCATCGCGCGAGGACGATCTCATTG
AGGTGGAGGAGGAGCCACTGGAGGAGCCAGAGGGTTCCACCAGCTCCATG
TCTGTGAAGAAGGCCAGCAGTGAGGGTTCAGTGGCTCCGCCCGAAACCGT
ACCGCTAGCCGTTTCCGCATCCTCGAAGGACATCAAGGGTGCTCCCAGCA
TTGGGGCTCTGGACACACTGACGGCCACATCCAAAATGACGGGTGTTACC
AACGAGGACGAGGGCGAGGAGGAAGGCGAGGAGGAGGACTTCGATGTGCA
GTTCGTCTACGCAAGCTTTCTAGACCAT

BO27155.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG17122-RA 1797 CG17122-PA 1..1794 17..1810 8970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG17122-RA 1947 CG17122-RA 82..1875 17..1810 8970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20273461..20275254 1810..17 8970 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:06:05 has no hits.

BO27155.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-15 09:23:11 Download gff for BO27155.complete
Subject Subject Range Query Range Percent Splice Strand
CG17122-RA 82..1875 17..1812 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:28:54 Download gff for BO27155.complete
Subject Subject Range Query Range Percent Splice Strand
CG17122-RA 82..1875 17..1812 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:32 Download gff for BO27155.complete
Subject Subject Range Query Range Percent Splice Strand
CG17122-RA 82..1875 17..1812 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:32 Download gff for BO27155.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20273459..20275254 17..1812 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:28:54 Download gff for BO27155.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20266559..20268354 17..1812 99   Minus

BO27155.pep Sequence

Translation from 16 to 1828

> BO27155.pep
MPPKVKKEKKDVNKVTQVDRTFYELTITDLNQKLARLRSHVTTVDESNIT
LTEKLKEVEADGVDVAAHLERTLAERNNSITELEERLVEITKVRDVENRV
AQEKIGDLESKYKAMHDQLTSEIKLLNGKLNSLDEFRIQRDVLLAKFDEQ
EADLNEREKDHKEALYNMEQRAVVEKDALKKEVEQKLLQVSEDFTRSSEI
RNAGYTRRLIRENIALQKEIDLLVMSQIKLQQAYTNQKSKHKEMEEQYSA
LDQIKNELVRNSVNKIKIIEGLTRNYEKLKAKYVEVLRYKKAYESLLQAE
KCENVKQKDAAGKLRTLAKRMEILDLDNRNLEVVHAQHEIEITRLRGVIQ
EIKCTVRDAIVAEQAAKKFPERLVEANVDDPAMINEVREEAISLCKLKRS
DLLSQLMSIVSSHSEELPKTPSIASIVSATSSLYAPGKMGFMPTRPKATP
FDAFRSEVIEQEPDRTVPEDLQKQKMQDRLMTSLRGDENTIIDVEFGTTL
YVSSSREDDLIEVEEEPLEEPEGSTSSMSVKKASSEGSVAPPETVPLAVS
ASSKDIKGAPSIGALDTLTATSKMTGVTNEDEGEEEGEEEDFDVQFVYAS
FLDH

BO27155.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:13:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG17122-PA 598 CG17122-PA 1..598 1..598 2957 100 Plus