Clone BO27157 Report

Search the DGRC for BO27157

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG17327-RA
Protein status:BO27157.pep: Imported from assembly
Sequenced Size:451

Clone Sequence Records

BO27157.complete Sequence

451 bp assembled on 2010-08-18

GenBank Submission: KX795539

> BO27157.complete
GAAGTTATCAGTCGACATGCCCACGTCAAGTAGCATCCTGCAGAAGTTCC
TCAGCAACGGTTTGGCCTTCGGCAAGTCCACCAAACTGGCGCTGGTGGTC
CGAACCGACCTAAAGATGTCCAAGGGAAAGACAGCGGCCCAGTGCGCCCA
TGCGGCGGTCATGTGCTACCAGAGCTCTGTGCAGGGAACCAAGCTGCAGA
ACGCCATTCTGCAGCGTTGGTGTCGCCTGGGACAGCCGAAGATAGTGCTG
CGCGTGGACAACTTCGAGCAGCTAAACTCCCTGGAGCGACAGGCCCAAGA
GTCGAACGTGGTGGCCGCCTTGGTGAGGGATGCCGGGCGCACTCAGCTGG
AATCTGGGACAGCAACGGTCCTCGGACTGGGTCCAGCCCCTGCCGAAGAT
CTAGACAAATTGGTGGCGCATTTGAAGCTTTTGGCAAGCTTTCTAGACCA
T

BO27157.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG17327-RC 420 CG17327-PC 1..417 17..433 2085 100 Plus
CG17327-RA 420 CG17327-PA 1..417 17..433 2085 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG44194-RB 851 CG44194-RB 386..802 17..433 2085 100 Plus
CG44194-RA 707 CG44194-RA 242..658 17..433 2085 100 Plus
CG17327-RC 851 CG17327-RC 386..802 17..433 2085 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12996925..12997341 433..17 2085 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:43:14 has no hits.

BO27157.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:19 Download gff for BO27157.complete
Subject Subject Range Query Range Percent Splice Strand
CG17327-RA 342..758 17..435 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:26 Download gff for BO27157.complete
Subject Subject Range Query Range Percent Splice Strand
CG17327-RA 242..658 17..435 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:07 Download gff for BO27157.complete
Subject Subject Range Query Range Percent Splice Strand
CG17327-RC 386..802 17..435 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:07 Download gff for BO27157.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12996922..12997341 17..435 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:26 Download gff for BO27157.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8822644..8823063 17..435 99   Minus

BO27157.pep Sequence

Translation from 16 to 451

> BO27157.pep
MPTSSSILQKFLSNGLAFGKSTKLALVVRTDLKMSKGKTAAQCAHAAVMC
YQSSVQGTKLQNAILQRWCRLGQPKIVLRVDNFEQLNSLERQAQESNVVA
ALVRDAGRTQLESGTATVLGLGPAPAEDLDKLVAHLKLLASFLDH

BO27157.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG17327-PC 139 CG17327-PC 1..139 1..139 689 100 Plus
CG17327-PA 139 CG17327-PA 1..139 1..139 689 100 Plus
CG1307-PE 186 CG1307-PE 73..186 23..139 269 47 Plus
CG1307-PD 186 CG1307-PD 73..186 23..139 269 47 Plus
CG1307-PC 186 CG1307-PC 73..186 23..139 269 47 Plus