Clone BO27158 Report

Search the DGRC for BO27158

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG2898-RA
Protein status:BO27158.pep: Imported from assembly
Sequenced Size:1087

Clone Sequence Records

BO27158.complete Sequence

1087 bp assembled on 2010-09-22

GenBank Submission: KX795278

> BO27158.complete
GAAGTTATCAGTCGACATGTGCTGTGCACCGATGTGTGGGCCCTCGGTCT
GCGGGCCTTCGATGTGCAACCCGCCCGCTTGTCGTGTGCCACTGGAGCCA
CTGCATCCGTCAACAGTCTACCACTGCTGTCCGTCCACGAAGTGCACGCT
GTGCTGTAATAACGAATCAAAACACGAGTGCCACTGCACCTGCCAGCGCA
ACAAGCACATCGTGGAGGCGTTCAGCTGCCTGTTCCGGGTTAGCAAGTTC
CAGATCCTGACCACCCTCTTTCTACTGGCCTATCATGAGAGCAGACCGCT
GCCGCGCTTTCCGCGCGATCGCAACTGGTCGGTGATGGAGAACGTGAAGG
CACCGTACTCGGAGTTGCACGACCTGAGGATCTACGACAGCCTGTTCGAT
CGCTGTGGCAACCGCATCGATCCGCTCGACCAAAAGAACACGTACAAGCT
GTTGCGCCTGATCTTTCTCGGTCCAGTGCTAGTGCCCGATCAGCAGGCAC
AGCTACTGGCCATGCTGTACACGCTAAATGCCCATGCCGTCTGTCCCGTG
GATCTCAATGGCCTGCTATCGGTACTGCAGTATGTGAAGCTGGATGAGCT
GGTGTGCGGCATCTTGGAGCAGGACGGACGAGCGAAACGTTTCCACAGCG
GGCGGCAGTGCTTGGAGCTGTGCAATCTCTACCAGAAAGTGGTCGCCACG
GACAAGGATGCGGTTATTAAAAAGCATCGCCGTCGCAAGGAGAAGTCCAA
GAGCAAGGATTCGGAGGCACAGAAGAAGCCGCGTAGAACCATCACCGCGC
AGATATACTGCACGCGTCGCGTTCCGGAGCCCGAGGATGTTAGCTCACGG
ATCGAGACTATCACTCCAATCGTACGCAGTACAGCCACCTCGTTGCGTCG
CTCCTCCAACAAGAAAAGCTGGATGCCGGTCAATCGGAGCAGCATTAATA
ACTCGGAGAAGGGATCTCGCCGGGGTTCGCGCAATCTCGCGGGTTCACCG
AAGAGAAACAAGCCGGAAGTGTCCAATGTGGGAGTGCGAATGCAGGGCGG
CGACCGCCAAAGAACGAAGGCAAGCTTTCTAGACCAT

BO27158.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG2898-RA 1056 CG2898-PA 1..1053 17..1069 5250 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG2898-RA 1255 CG2898-RA 125..1177 17..1069 5250 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:41:33
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10375498..10376550 17..1069 5250 99.9 Plus
Blast to na_te.dros performed on 2014-11-28 07:41:34 has no hits.

BO27158.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:19 Download gff for BO27158.complete
Subject Subject Range Query Range Percent Splice Strand
CG2898-RA 49..1101 17..1071 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:52 Download gff for BO27158.complete
Subject Subject Range Query Range Percent Splice Strand
CG2898-RA 125..1177 17..1071 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:52 Download gff for BO27158.complete
Subject Subject Range Query Range Percent Splice Strand
CG2898-RA 125..1177 17..1071 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:52 Download gff for BO27158.complete
Subject Subject Range Query Range Percent Splice Strand
X 10375498..10376550 17..1071 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:52 Download gff for BO27158.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10269531..10270583 17..1071 99   Plus

BO27158.pep Sequence

Translation from 16 to 1087

> BO27158.pep
MCCAPMCGPSVCGPSMCNPPACRVPLEPLHPSTVYHCCPSTKCTLCCNNE
SKHECHCTCQRNKHIVEAFSCLFRVSKFQILTTLFLLAYHESRPLPRFPR
DRNWSVMENVKAPYSELHDLRIYDSLFDRCGNRIDPLDQKNTYKLLRLIF
LGPVLVPDQQAQLLAMLYTLNAHAVCPVDLNGLLSVLQYVKLDELVCGIL
EQDGRAKRFHSGRQCLELCNLYQKVVATDKDAVIKKHRRRKEKSKSKDSE
AQKKPRRTITAQIYCTRRVPEPEDVSSRIETITPIVRSTATSLRRSSNKK
SWMPVNRSSINNSEKGSRRGSRNLAGSPKRNKPEVSNVGVRMQGGDRQRT
KASFLDH

BO27158.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG2898-PA 351 CG2898-PA 1..351 1..351 1885 100 Plus