BO27158.complete Sequence
1087 bp assembled on 2010-09-22
GenBank Submission: KX795278
> BO27158.complete
GAAGTTATCAGTCGACATGTGCTGTGCACCGATGTGTGGGCCCTCGGTCT
GCGGGCCTTCGATGTGCAACCCGCCCGCTTGTCGTGTGCCACTGGAGCCA
CTGCATCCGTCAACAGTCTACCACTGCTGTCCGTCCACGAAGTGCACGCT
GTGCTGTAATAACGAATCAAAACACGAGTGCCACTGCACCTGCCAGCGCA
ACAAGCACATCGTGGAGGCGTTCAGCTGCCTGTTCCGGGTTAGCAAGTTC
CAGATCCTGACCACCCTCTTTCTACTGGCCTATCATGAGAGCAGACCGCT
GCCGCGCTTTCCGCGCGATCGCAACTGGTCGGTGATGGAGAACGTGAAGG
CACCGTACTCGGAGTTGCACGACCTGAGGATCTACGACAGCCTGTTCGAT
CGCTGTGGCAACCGCATCGATCCGCTCGACCAAAAGAACACGTACAAGCT
GTTGCGCCTGATCTTTCTCGGTCCAGTGCTAGTGCCCGATCAGCAGGCAC
AGCTACTGGCCATGCTGTACACGCTAAATGCCCATGCCGTCTGTCCCGTG
GATCTCAATGGCCTGCTATCGGTACTGCAGTATGTGAAGCTGGATGAGCT
GGTGTGCGGCATCTTGGAGCAGGACGGACGAGCGAAACGTTTCCACAGCG
GGCGGCAGTGCTTGGAGCTGTGCAATCTCTACCAGAAAGTGGTCGCCACG
GACAAGGATGCGGTTATTAAAAAGCATCGCCGTCGCAAGGAGAAGTCCAA
GAGCAAGGATTCGGAGGCACAGAAGAAGCCGCGTAGAACCATCACCGCGC
AGATATACTGCACGCGTCGCGTTCCGGAGCCCGAGGATGTTAGCTCACGG
ATCGAGACTATCACTCCAATCGTACGCAGTACAGCCACCTCGTTGCGTCG
CTCCTCCAACAAGAAAAGCTGGATGCCGGTCAATCGGAGCAGCATTAATA
ACTCGGAGAAGGGATCTCGCCGGGGTTCGCGCAATCTCGCGGGTTCACCG
AAGAGAAACAAGCCGGAAGTGTCCAATGTGGGAGTGCGAATGCAGGGCGG
CGACCGCCAAAGAACGAAGGCAAGCTTTCTAGACCAT
BO27158.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:41:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2898-RA | 1056 | CG2898-PA | 1..1053 | 17..1069 | 5250 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:41:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2898-RA | 1255 | CG2898-RA | 125..1177 | 17..1069 | 5250 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:41:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 10375498..10376550 | 17..1069 | 5250 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:41:34 has no hits.
BO27158.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:19 Download gff for
BO27158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 49..1101 | 17..1071 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:52 Download gff for
BO27158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 125..1177 | 17..1071 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:52 Download gff for
BO27158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2898-RA | 125..1177 | 17..1071 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:52 Download gff for
BO27158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 10375498..10376550 | 17..1071 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:52 Download gff for
BO27158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 10269531..10270583 | 17..1071 | 99 | | Plus |
BO27158.pep Sequence
Translation from 16 to 1087
> BO27158.pep
MCCAPMCGPSVCGPSMCNPPACRVPLEPLHPSTVYHCCPSTKCTLCCNNE
SKHECHCTCQRNKHIVEAFSCLFRVSKFQILTTLFLLAYHESRPLPRFPR
DRNWSVMENVKAPYSELHDLRIYDSLFDRCGNRIDPLDQKNTYKLLRLIF
LGPVLVPDQQAQLLAMLYTLNAHAVCPVDLNGLLSVLQYVKLDELVCGIL
EQDGRAKRFHSGRQCLELCNLYQKVVATDKDAVIKKHRRRKEKSKSKDSE
AQKKPRRTITAQIYCTRRVPEPEDVSSRIETITPIVRSTATSLRRSSNKK
SWMPVNRSSINNSEKGSRRGSRNLAGSPKRNKPEVSNVGVRMQGGDRQRT
KASFLDH
BO27158.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2898-PA | 351 | CG2898-PA | 1..351 | 1..351 | 1885 | 100 | Plus |