BO27162.complete Sequence
517 bp assembled on 2010-08-18
GenBank Submission: KX796232
> BO27162.complete
GAAGTTATCAGTCGACATGGGCATGATGGACAACAATGGCGTCGGCAAGC
TGACACAAGAATCTCTAAAACGCAAGGAGCGTCTGCAAAAACTCCGGGAA
CAAGTGCAAAACAAAGGAGGAGACGCTGCCGAGTCCATTGAAAAGTTACC
CAAACCAGTTTTCCGCAGCTACAAGCCCCAGAATGAGACCACCGATGGCG
AGATTCTAGCACAGGAACCCACGGGCAACATAGAATCAGCTGTGGAGGAT
CAATTGAGTCTGCTCCAGCAGCCCATGGTGATAGATGAGATTGACATAAC
CAACCTGGCTCCCCGAAAACCCGACTGGGATCTGAAGCGGGATGCCAGCA
AAAAGTTGGAGCGACTGGAACGACGTACCCAGAAAGCTATTGCTGAACTC
ATCCGTGAGCGACTGAAACTGAACCAAATGGAGGATATCAGCCAAGCGGT
GAATGTGGCCACGGCTCATGCAGGTGAAAGTGTTCAGGAGGATTATGACG
CAAGCTTTCTAGACCAT
BO27162.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15525-RA | 486 | CG15525-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15525-RA | 654 | CG15525-RA | 101..585 | 15..499 | 2425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29997030..29997375 | 499..154 | 1730 | 100 | Minus |
3R | 32079331 | 3R | 29997438..29997576 | 153..15 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:43:03 has no hits.
BO27162.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:17 Download gff for
BO27162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7911-RB | 579..1061 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:21 Download gff for
BO27162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15525-RA | 103..585 | 17..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:03 Download gff for
BO27162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15525-RA | 103..585 | 17..501 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:03 Download gff for
BO27162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29997028..29997375 | 154..501 | 99 | <- | Minus |
3R | 29997438..29997574 | 17..153 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:21 Download gff for
BO27162.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25822750..25823097 | 154..501 | 99 | <- | Minus |
arm_3R | 25823160..25823296 | 17..153 | 100 | | Minus |
BO27162.pep Sequence
Translation from 16 to 517
> BO27162.pep
MGMMDNNGVGKLTQESLKRKERLQKLREQVQNKGGDAAESIEKLPKPVFR
SYKPQNETTDGEILAQEPTGNIESAVEDQLSLLQQPMVIDEIDITNLAPR
KPDWDLKRDASKKLERLERRTQKAIAELIRERLKLNQMEDISQAVNVATA
HAGESVQEDYDASFLDH
BO27162.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15525-PA | 161 | CG15525-PA | 1..161 | 1..161 | 808 | 100 | Plus |