Clone BO27166 Report

Search the DGRC for BO27166

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG15891-RA
Protein status:BO27166.pep: Imported from assembly
Sequenced Size:481

Clone Sequence Records

BO27166.complete Sequence

481 bp assembled on 2010-09-22

GenBank Submission: KX798296

> BO27166.complete
GAAGTTATCAGTCGACATGTTTTCGATATTTGGCAAACGCAAGCCCGCGG
AAACGCCCACGGATGACCAGCCCATCCAGGGACCGGCGGAGGCAACCCGT
CCAGGCACCAGTGTCGATGATTTCGTGTTCATAGAGCGCAAACCAGTACC
GGATGCTCCTCATCCGGGTGTTCCAGCCGGCTCCATGTATCCACCTATGC
CGCCAGCGGGCTATCTGCCCTATCCGCCGATGCCAGGACCGCGCAGCGAT
CAAGTGAAGCAGCCCGGAGCCCAAGGACCCGTCAATTACTTGCAGGACAT
TCCATTCGAGCTGGCACCCGGATTGGCCAACAAGGATCGCTACACCAGCA
CCCAAATGCAGGTGGACAGCATATTGGCGCTACTAACGCGCCAATTGTCC
GTGGACGAGCTGGCCGAGGAGTACACCTTCGCCCTGGAGCGATCCGTGCA
GAACGAGTGTTACGCAAGCTTTCTAGACCAT

BO27166.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG15891-RD 450 CG15891-PD 1..447 17..463 2235 100 Plus
CG15891-RA 450 CG15891-PA 1..447 17..463 2235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:43:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG15891-RD 829 CG15891-RD 293..739 17..463 2235 100 Plus
CG15891-RA 599 CG15891-RA 63..509 17..463 2235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6294607..6295053 463..17 2235 100 Minus
Blast to na_te.dros performed on 2014-11-28 07:43:46 has no hits.

BO27166.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:20 Download gff for BO27166.complete
Subject Subject Range Query Range Percent Splice Strand
CG15891-RA 70..509 24..465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:00 Download gff for BO27166.complete
Subject Subject Range Query Range Percent Splice Strand
CG15891-RA 70..509 24..465 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:02:37 Download gff for BO27166.complete
Subject Subject Range Query Range Percent Splice Strand
CG15891-RA 70..509 24..465 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:02:37 Download gff for BO27166.complete
Subject Subject Range Query Range Percent Splice Strand
X 6294603..6295046 24..465 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:00 Download gff for BO27166.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6188636..6189079 24..465 99   Minus

BO27166.pep Sequence

Translation from 16 to 481

> BO27166.pep
MFSIFGKRKPAETPTDDQPIQGPAEATRPGTSVDDFVFIERKPVPDAPHP
GVPAGSMYPPMPPAGYLPYPPMPGPRSDQVKQPGAQGPVNYLQDIPFELA
PGLANKDRYTSTQMQVDSILALLTRQLSVDELAEEYTFALERSVQNECYA
SFLDH

BO27166.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG15891-PD 149 CG15891-PD 1..149 1..149 797 100 Plus
CG15891-PA 149 CG15891-PA 1..149 1..149 797 100 Plus