BO27167.complete Sequence
1189 bp assembled on 2010-09-22
GenBank Submission: KX796556
> BO27167.complete
GAAGTTATCAGTCGACATGTTGGCGCTCCTCCGGCCAGCACTGTGGCTGG
GAAGCTGCCTTCGTGGCTATCACATGCATGCCGCCTCTACGCAGCAGCGG
GGCGACACGTCCTTGGTTCTGGTGGATGAGGCCCGCCGCTTTATCCAGGA
CTGCCTGCTACGGGTTGGAGTTTCCCCCTCCAAGGTGCGCTGCATCAGCG
AGTTCCTGGTTGTGGCGGACTATCGAGGAAACTACGGAAGCGGGCTGAAT
CGCCTGGATTACTATCTCAGTGATCTGCAGAGCGGGCATGCCAAGGTGGG
CGCAGAGCCTTCAATAATCAGTGAAACGGTGTCCACCGCCCATGTAAATG
GCAATTCCGCCTTGGGTGTGTTTGTGGGAAACTTTTGTATGGATTTGGCG
GTGAAGAAAGCTGAAGACTCTGGCATCGGTTTCGTAGTGGCCCAGCAATC
TCACGACATTGGCATGGCCAGCTGGTTTACATTTCGCGCTGCCGGCAAGG
GATTAGCCGGAATCGTGATGTCCAATTCGGCTCCAACGATGATGGGTCCC
AACTCAAAGTCTGCCAGCATTGGCTCCAACTGCTTTGCCTTCTGCGTAAA
GGGTGAGGAGTACCATTTTGTTCTAGACATGGCGACCAGCGTGAAGGATA
TTGGAGCCGTGGAATGGGCTTGGGCCAACGATGAGTATATACCGCATGGC
TGGGCGGCCAACGAGGGTGGCTTATCCACCTGTTTTCCCAGCTTGGCCTT
AAGGACACCATTACTATTTCCTGCTGGTGGTCACAAAGGCTATTGCCTGT
CAGCCGTGATAGATATTCTATGTGGAGTGCTCTCTGGTGCCCAATATGCC
ACTCATATAACCATGGACCAGAACCAACCATCGAACTTGGGTCAAGTATT
TATTGCTCTCGATCCAGAATTTTTCTTGCCCAACTTTATGGAACGTTTCG
ATGACTTTTGTGGTCGCATCCAGAATAGCCAGCCGGCGGACGATTCAGAG
CCCATCCGGCTACCTGGCGAACTGGAGAGGATGCACATGAACTACGTGGA
AGATTTGCGGGCTTTAGCCTATCCGAATAGTCTTTTGACCAAGTACAAAG
AAGTGGCGGAAAGGCTGTGCGTAAAACCCATCGAGCTGGCTTTTGATAGG
TGTCAGTCCAGGAAGAGCTTTGCAAGCTTTCTAGACCAT
BO27167.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18808-RA | 1158 | CG18808-PA | 1..1155 | 17..1171 | 5775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:43:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18808-RA | 1354 | CG18808-RA | 79..1233 | 17..1171 | 5775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4806174..4807328 | 1171..17 | 5775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:43:54 has no hits.
BO27167.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:21 Download gff for
BO27167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18808-RA | 84..1233 | 22..1173 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:02 Download gff for
BO27167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18808-RA | 84..1233 | 22..1173 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:02:42 Download gff for
BO27167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18808-RA | 84..1233 | 22..1173 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:02:42 Download gff for
BO27167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4806172..4807323 | 22..1173 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:02 Download gff for
BO27167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4806172..4807323 | 22..1173 | 99 | | Minus |
BO27167.pep Sequence
Translation from 16 to 1189
> BO27167.pep
MLALLRPALWLGSCLRGYHMHAASTQQRGDTSLVLVDEARRFIQDCLLRV
GVSPSKVRCISEFLVVADYRGNYGSGLNRLDYYLSDLQSGHAKVGAEPSI
ISETVSTAHVNGNSALGVFVGNFCMDLAVKKAEDSGIGFVVAQQSHDIGM
ASWFTFRAAGKGLAGIVMSNSAPTMMGPNSKSASIGSNCFAFCVKGEEYH
FVLDMATSVKDIGAVEWAWANDEYIPHGWAANEGGLSTCFPSLALRTPLL
FPAGGHKGYCLSAVIDILCGVLSGAQYATHITMDQNQPSNLGQVFIALDP
EFFLPNFMERFDDFCGRIQNSQPADDSEPIRLPGELERMHMNYVEDLRAL
AYPNSLLTKYKEVAERLCVKPIELAFDRCQSRKSFASFLDH
BO27167.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18808-PA | 385 | CG18808-PA | 1..385 | 1..385 | 2030 | 100 | Plus |
| CG10512-PB | 381 | CG10512-PB | 20..378 | 25..372 | 625 | 38.8 | Plus |
| CG10512-PA | 446 | CG10512-PA | 85..443 | 25..372 | 625 | 38.8 | Plus |
| CG10512-PD | 361 | CG10512-PD | 8..358 | 33..372 | 624 | 39.4 | Plus |
| CG10512-PC | 361 | CG10512-PC | 8..358 | 33..372 | 624 | 39.4 | Plus |
