BO27168.complete Sequence
1048 bp assembled on 2010-09-22
GenBank Submission: KX797176
> BO27168.complete
GAAGTTATCAGTCGACATGGAAATGCGCGATCGGCTGTACCAAATGATGG
TGAGCCAGAGCTTTATGTCGAGAGGCACGGTGACCGCGAGCATGGCCAAT
TTTGCGATTGGAAATCTTAGAAGTTCCGATGCTGTAGAAAAGAGAGTGAT
CAAAATTCTGCTGGTGATCGAGGAGAAGTATCGGAGTTACTTTGACAGCT
ATAGGAAGGAGCTAGAGCTCCAGAGGATAGCGGCAGAAACACTGCACCAG
CTAATCCAGCGCTACAAGATCACCATGCAGCTGGACACCAGCTGCACATG
TCCGCAGATCTATGATATCGAATCGGATGATGCGATCATCAACAAGTTCT
ACATCCACTATCAGGTGATAGCCAGTTCAAACAAGAATCAGTGTTGGGCC
ATCCAAAGCCTGCGTCCGTATGTGCTTGTCTTTCGCCGTGAATGTGCCAA
GTTGAATAGGAGCGAGGAGAGCCCCTTCATTCTGGGCGATGCCTTCCACA
AGCCCATTCAGTTCTTTATCGACCTGGTGGAGGAGCTGTTCGCCTACTTC
TACAGTGGACACCTTCAGCTGGATTGCGCGGCGCGTCTGTTGGATCCCTT
GGATCTGTACCGAATGGAGTGCTACATGAAGCTATTGGAGCCCAACGAGG
ACTTTGCCGAATACTTTCTGCACAACATAAGCTTCTGCAAATGCATGCGG
CCGCCACCGATGTGTCCGCCGTACGAACACCATCAGAAGATCAAGGATCA
GTCCGACGCATATCTCAGTCATGCCAAGAAGAAGCGATGTGCCAGGCGGT
TTGAGAGAATGGCCCAAAACGAGGCACAGACTGCGAAGCGGGAAAGCGGC
TCAGTGGAACGGAAAATGTCCATTGGCAGCGCGAGGACGACCAGGAGTCT
AAGTCGGGAGGCTTCTGTCGTGGAAGAAGCCGTATCCGTATCCAATCAGC
AACATGAACGCACCCTAAGGGATCAGCTGATGTGCGCCCTTAGCATTTCC
CCCGAAAAAAGGCACGACGCCACCAACCAAGCAAGCTTTCTAGACCAT
BO27168.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:44:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-RA | 1017 | CG30391-PA | 1..1014 | 17..1030 | 5070 | 100 | Plus |
| CG30393-RA | 1065 | CG30393-PA | 130..683 | 146..699 | 1030 | 79.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:44:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-RA | 1538 | CG30391-RA | 98..1111 | 17..1030 | 5070 | 100 | Plus |
| CG30393-RA | 1216 | CG30393-RA | 194..747 | 146..699 | 1030 | 79.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21265232..21266245 | 1030..17 | 5070 | 100 | Minus |
| 2R | 25286936 | 2R | 21266833..21267386 | 699..146 | 1030 | 79.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:44:02 has no hits.
BO27168.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:23 Download gff for
BO27168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 98..1111 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:05 Download gff for
BO27168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 98..1111 | 17..1032 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:02:46 Download gff for
BO27168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 98..1111 | 17..1032 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:02:46 Download gff for
BO27168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21265229..21266245 | 17..1032 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:05 Download gff for
BO27168.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17152734..17153750 | 17..1032 | 99 | | Minus |
BO27168.pep Sequence
Translation from 16 to 1048
> BO27168.pep
MEMRDRLYQMMVSQSFMSRGTVTASMANFAIGNLRSSDAVEKRVIKILLV
IEEKYRSYFDSYRKELELQRIAAETLHQLIQRYKITMQLDTSCTCPQIYD
IESDDAIINKFYIHYQVIASSNKNQCWAIQSLRPYVLVFRRECAKLNRSE
ESPFILGDAFHKPIQFFIDLVEELFAYFYSGHLQLDCAARLLDPLDLYRM
ECYMKLLEPNEDFAEYFLHNISFCKCMRPPPMCPPYEHHQKIKDQSDAYL
SHAKKKRCARRFERMAQNEAQTAKRESGSVERKMSIGSARTTRSLSREAS
VVEEAVSVSNQQHERTLRDQLMCALSISPEKRHDATNQASFLDH
BO27168.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-PA | 338 | CG30391-PA | 1..338 | 1..338 | 1755 | 100 | Plus |
| CG30393-PA | 354 | CG30393-PA | 1..345 | 1..342 | 928 | 53.7 | Plus |
| CG31910-PA | 262 | CG31910-PA | 39..242 | 34..234 | 325 | 30.9 | Plus |
