Clone BO27169 Report

Search the DGRC for BO27169

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG32281-RA
Protein status:BO27169.pep: Imported from assembly
Sequenced Size:1405

Clone Sequence Records

BO27169.complete Sequence

1405 bp assembled on 2010-11-23

GenBank Submission: KX797432

> BO27169.complete
GAAGTTATCAGTCGACATGTTTATAGTGTCCAGATTGAAGGATTTAACGA
TTATAACGAATCGTTTACGTCACTACTTTCGAAACATGGACGTCAAGGAG
CTGCAGCCTCCCAGCTCGGTGCGCGGAATGCAGGAGCTGCAAAGGGAACA
GTTCCGAAAGATCGTTCAAGTTCCGCGTTTACGGGTGCCCGAGTCTCAGG
TGCAACGTGTTATGCCGCTGGTCAAAAAGTTCCTGCTGAAAATGGAGCAC
CTGCATCCTGTCCGAGCTGTGGACCAATCTCGAGAGATCCTACTACATCC
AACGCCTGTCAAAAACTGGGATTCCCTGCCAACAGAGGATCTGCAGAGGC
AGAAAGTCAATGCCGAGAACTTCTCCTTCGCCGACCTCGAGTTGAGGTAT
GAAAATTGGAGCGCCAATGAAATCCTGAAAAGCGTGCTACCCACGGAGGA
GGAAGGTCTCACCTCCTACTCCCGCATAGGCCACATTGCCCACCTTAATC
TTCGTGATCATCTGCTGCCCTATAAGCAGCTCATCGGTCAGGTGCTCCGC
GACAAGCTTCCCAATTGCCGCACGGTGGTTAACAAAGCATCCTCCATTGA
CAACACCTACCGCAACTTCCAGCTGGAGCTGATCTGTGGGGACCCCGATT
ACCAGGTGGAAACTAAGGAGAACGGAGTCCCCTTTGAGTTTGATTTCTCC
AAGGTGTACTGGAATCCCCGCCTCTCCACGGAGCACGAGAGAATTGTCAA
AATGCTGAAATCGGACGATGTTCTCTATGATGTATTTGCTGGCGTGGGTC
CATTCAGTATTCCTGCTGCCAAGAAGCGATGCCATGTCCTGGCCAATGAC
CTGAACCCTGAGAGTTTTCGTTGGCTCCAGCATAATGCCAAGAGAAATAA
GTGCTTGCCCAATATAAAGATGAGCAATAAAGATGGTAGACAGTTTATCG
TCGAGGAGCTAAGGGAGGACCTGCTAAAGCGTCTATGTACCACGGATACT
ACTACCTATGGCATACATATTACAATGAATCTACCAGCAATGGCTGTAGA
GTTCCTGGACGCATTTCGTGGTCTCTACAGCGCAGATGAGCTAGCGCAGT
TACCTACAAACGTGTGCTATCCCACTGTTCATGTTTACTCCTTTGCCAAG
GGTGAGAACACCAAGGAATTGGTGCGTCAACTGGTGGAGAGCAATCTGGG
AGCCAGCCTGGACGAAAACCTGCTCCAGGGAATAAATTTTGTACGAAATG
TTGCCCCCAACAAGGACATGTATAGAGTGTCCTTCAAGCTATCACTAAAC
ATGCTAACCACTTTAAAGGAAGTCGAGGTCACGAGAAAACGTTATGCAGA
GGAGGAGCTGGAGGTCGCCACCAAAGTGAAATGTGTTGCAAGCTTTCTAG
ACCAT

BO27169.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG32281-RA 1374 CG32281-PA 1..1371 17..1387 6855 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG32281-RA 1539 CG32281-RA 128..1498 17..1387 6855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3169502..3170872 17..1387 6855 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:36:04 has no hits.

BO27169.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-23 19:04:24 Download gff for BO27169.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 134..1498 23..1389 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:33:29 Download gff for BO27169.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 134..1498 23..1389 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:33 Download gff for BO27169.complete
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 134..1498 23..1389 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:33 Download gff for BO27169.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3169508..3170872 23..1389 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:33:29 Download gff for BO27169.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3169508..3170872 23..1389 99   Plus

BO27169.pep Sequence

Translation from 16 to 1405

> BO27169.pep
MFIVSRLKDLTIITNRLRHYFRNMDVKELQPPSSVRGMQELQREQFRKIV
QVPRLRVPESQVQRVMPLVKKFLLKMEHLHPVRAVDQSREILLHPTPVKN
WDSLPTEDLQRQKVNAENFSFADLELRYENWSANEILKSVLPTEEEGLTS
YSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKASSIDNTYRN
FQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSD
DVLYDVFAGVGPFSIPAAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNI
KMSNKDGRQFIVEELREDLLKRLCTTDTTTYGIHITMNLPAMAVEFLDAF
RGLYSADELAQLPTNVCYPTVHVYSFAKGENTKELVRQLVESNLGASLDE
NLLQGINFVRNVAPNKDMYRVSFKLSLNMLTTLKEVEVTRKRYAEEELEV
ATKVKCVASFLDH

BO27169.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG32281-PA 457 CG32281-PA 1..457 1..457 2373 100 Plus