BO27172.complete Sequence
658 bp assembled on 2010-08-18
GenBank Submission: KX794288
> BO27172.complete
GAAGTTATCAGTCGACATGCGTGATTATGCGTCCAACGTGATACGTTCGC
ATCGCTGCCTTTGCATTTTTACGGTGCTCCAATTGACCCTAATGCTCTCG
ATGCTGGAAGTTCAAATCCAAATTGACCAATCGCCGGAGCTCCAGCGACC
TATGACCCGAGTGCTTTTGGGGGCCCAACTAGGGGAGCTTGCCTGGAGTC
CATTGTTTTCCGGTTTTGCCATGGGTGCCATGTTCTACGGCTATGGTTTG
ATACACCTGCCCAGCAAAGGACCCCTCGGGTGCTTCTTCTCCAGGCTGCG
AACAGCTGGCTTGTCCGTGTGGCAACAATGTAGTCCCGTGATGCTTGTGC
CCTGGACCTTGAAGGTGGCCCAGGGCCTAAGCCTATTCCCTTGCCATTTG
TGGGAGTTTCTTGCGAATGAGGTGTGCTTAGAGACCGACAATTGTCTGCA
GCACGTCATTCTGGCTTTTGTACTGTGGATATACCTGCTAATCCTGGCCA
TCACTAGCTTGGTCTCTGTTGTGAGACTCAATCTTCAGATGCTGGCTGAC
AGGCACATTCACAGCAGAGACCACGAGCTGCGGGCCTATGTACGGGGAAT
CAATGAACTTCTCGGATTTGAGATGATAATGGTCACCGAAGCAAGCTTTC
TAGACCAT
BO27172.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:43:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31867-RB | 627 | CG31867-PB | 1..624 | 17..640 | 3120 | 100 | Plus |
CG31867-RA | 627 | CG31867-PA | 1..624 | 17..640 | 3120 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:43:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31867-RB | 701 | CG31867-RB | 63..686 | 17..640 | 3120 | 100 | Plus |
CG31867-RA | 839 | CG31867-RA | 63..686 | 17..640 | 3120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:43:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11144732..11145355 | 640..17 | 3120 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:43:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy3 | 6973 | gypsy3 GYPSY3 6973bp | 5608..5636 | 617..645 | 109 | 86.2 | Plus |
BO27172.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:56:18 Download gff for
BO27172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31867-RA | 63..686 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:20:24 Download gff for
BO27172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31867-RA | 63..686 | 17..642 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:17:05 Download gff for
BO27172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31867-RA | 63..686 | 17..642 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:17:05 Download gff for
BO27172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11144729..11145355 | 17..642 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:20:24 Download gff for
BO27172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11144729..11145355 | 17..642 | 99 | | Minus |
BO27172.pep Sequence
Translation from 16 to 658
> BO27172.pep
MRDYASNVIRSHRCLCIFTVLQLTLMLSMLEVQIQIDQSPELQRPMTRVL
LGAQLGELAWSPLFSGFAMGAMFYGYGLIHLPSKGPLGCFFSRLRTAGLS
VWQQCSPVMLVPWTLKVAQGLSLFPCHLWEFLANEVCLETDNCLQHVILA
FVLWIYLLILAITSLVSVVRLNLQMLADRHIHSRDHELRAYVRGINELLG
FEMIMVTEASFLDH
BO27172.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31867-PB | 208 | CG31867-PB | 1..208 | 1..208 | 1086 | 100 | Plus |
CG31867-PA | 208 | CG31867-PA | 1..208 | 1..208 | 1086 | 100 | Plus |