Clone BO27176 Report

Search the DGRC for BO27176

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:271
Well:76
Vector:pDNR-Dual
Associated Gene/TranscriptCG32371-RA
Protein status:BO27176.pep: Imported from assembly
Sequenced Size:916

Clone Sequence Records

BO27176.complete Sequence

916 bp assembled on 2010-09-22

GenBank Submission: KX799283

> BO27176.complete
GAAGTTATCAGTCGACATGTCTGAGAAATCAAAAACATCAGTAGTGAATG
TTCGCTACACTAACAAGTTGTCGAGCAATTCTTCGCGTGCGGAAATGCTA
TCCTGGGTGAATAACACGTTGAAATCGCAGTTTTTCAAGGTCGAGGAATT
GTGCACCGGAGCGGCATACTGCCAGTTAATGGACATACTGTTTGCCCGGT
CGATCCCGATGCAGCGAGTCAAGTTTCGCACAAACGTTGAGTATGAGTAC
ATCCAGAATTTCAAGCTTTTACAGGGATGTTTCAACAAATTTGTTGTTGA
TAAGATCATTCCCATCGACCGGCTGGTCAAGGGACGATACCAGGATAACT
TCGAGTTCCTTCAGTGGTTTCGCAAGTTCTTCGATGCCAACTATGAGAGT
CGAGAATATGATCCTGTGATAGCTCGGAATGGAGCAATGCTGGGACTTGG
CTCGCCTCCCATGGAAGCCAAGTTACGCAAATCAGTGAATAAGTCAAATC
CCCAAACTAAACCCACCGAAGAATCCTCTGCTCAAACAGATAGGGCAACA
ACAGAACCGAAAAATCAAGTGTATAAGTCAAATTCTGAAAATAAAACCAT
CGAAGAAGCCTCTGCTCAAACAGATTTGGCAATAACAGAGCCGGAAAATC
AAGTGCATGAATCCCAAACTAAAACCACCGAAAAAGCCTCTGCTCAAACA
GAAAAAGCAACAACAGAGCCGGATAGTGAAGGTTCCATTGAGGAGTTGCG
GAATTACTGTAAATATGTTTCGAGAATGAAACAGGAGAGGAACTTTTACT
TATCAAAACTCCGAGCTATTGATCATATTTGCCAGAAATACAATAGTGGC
CGAGATAGGGTAATCTTAGAAAAGATTACTAAGATTATTTACAGCGAAGC
AAGCTTTCTAGACCAT

BO27176.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32371-RA 885 CG32371-PA 1..882 17..898 4410 100 Plus
CG32371-RA 885 CG32371-PA 468..629 568..723 295 80.2 Plus
CG32371-RA 885 CG32371-PA 552..707 484..645 295 80.2 Plus
Eb1-RF 894 CG3265-PF 104..381 141..418 250 72.7 Plus
Eb1-RG 876 CG3265-PG 104..353 141..390 245 73.2 Plus
CG32371-RA 885 CG32371-PA 485..543 663..721 190 88.1 Plus
CG32371-RA 885 CG32371-PA 647..705 501..559 190 88.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:44:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32371-RA 1084 CG32371-RA 82..963 17..898 4410 100 Plus
CG32371-RA 1084 CG32371-RA 549..710 568..723 295 80.2 Plus
CG32371-RA 1084 CG32371-RA 633..788 484..645 295 80.2 Plus
Eb1-RF 1891 CG3265-RF 299..576 141..418 250 72.7 Plus
Eb1-RG 2043 CG3265-RG 206..455 141..390 245 73.2 Plus
CG32371-RA 1084 CG32371-RA 566..624 663..721 190 88.1 Plus
CG32371-RA 1084 CG32371-RA 728..786 501..559 190 88.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:44:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7767390..7768271 898..17 4410 100 Minus
3L 28110227 3L 7767565..7767720 645..484 295 80.2 Minus
3L 28110227 3L 7767643..7767804 723..568 295 80.2 Minus
3L 28110227 3L 7767567..7767625 559..501 190 88.1 Minus
3L 28110227 3L 7767729..7767787 721..663 190 88.1 Minus
Blast to na_te.dros performed on 2014-11-28 07:44:51 has no hits.

BO27176.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:24 Download gff for BO27176.complete
Subject Subject Range Query Range Percent Splice Strand
CG32371-RA 82..963 17..900 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:10 Download gff for BO27176.complete
Subject Subject Range Query Range Percent Splice Strand
CG32371-RA 82..963 17..900 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:03:00 Download gff for BO27176.complete
Subject Subject Range Query Range Percent Splice Strand
CG32371-RA 82..963 17..900 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:03:00 Download gff for BO27176.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7767388..7768271 17..900 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:10 Download gff for BO27176.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7760488..7761371 17..900 99   Minus

BO27176.pep Sequence

Translation from 16 to 916

> BO27176.pep
MSEKSKTSVVNVRYTNKLSSNSSRAEMLSWVNNTLKSQFFKVEELCTGAA
YCQLMDILFARSIPMQRVKFRTNVEYEYIQNFKLLQGCFNKFVVDKIIPI
DRLVKGRYQDNFEFLQWFRKFFDANYESREYDPVIARNGAMLGLGSPPME
AKLRKSVNKSNPQTKPTEESSAQTDRATTEPKNQVYKSNSENKTIEEASA
QTDLAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKY
VSRMKQERNFYLSKLRAIDHICQKYNSGRDRVILEKITKIIYSEASFLDH

BO27176.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG32371-PA 294 CG32371-PA 1..294 1..294 1512 100 Plus
Eb1-PG 291 CG3265-PG 3..273 10..293 582 44.1 Plus
Eb1-PA 291 CG3265-PA 3..273 10..293 582 44.1 Plus
Eb1-PD 291 CG3265-PD 3..273 10..293 582 44.1 Plus
Eb1-PB 291 CG3265-PB 3..273 10..293 582 44.1 Plus