BO27176.complete Sequence
916 bp assembled on 2010-09-22
GenBank Submission: KX799283
> BO27176.complete
GAAGTTATCAGTCGACATGTCTGAGAAATCAAAAACATCAGTAGTGAATG
TTCGCTACACTAACAAGTTGTCGAGCAATTCTTCGCGTGCGGAAATGCTA
TCCTGGGTGAATAACACGTTGAAATCGCAGTTTTTCAAGGTCGAGGAATT
GTGCACCGGAGCGGCATACTGCCAGTTAATGGACATACTGTTTGCCCGGT
CGATCCCGATGCAGCGAGTCAAGTTTCGCACAAACGTTGAGTATGAGTAC
ATCCAGAATTTCAAGCTTTTACAGGGATGTTTCAACAAATTTGTTGTTGA
TAAGATCATTCCCATCGACCGGCTGGTCAAGGGACGATACCAGGATAACT
TCGAGTTCCTTCAGTGGTTTCGCAAGTTCTTCGATGCCAACTATGAGAGT
CGAGAATATGATCCTGTGATAGCTCGGAATGGAGCAATGCTGGGACTTGG
CTCGCCTCCCATGGAAGCCAAGTTACGCAAATCAGTGAATAAGTCAAATC
CCCAAACTAAACCCACCGAAGAATCCTCTGCTCAAACAGATAGGGCAACA
ACAGAACCGAAAAATCAAGTGTATAAGTCAAATTCTGAAAATAAAACCAT
CGAAGAAGCCTCTGCTCAAACAGATTTGGCAATAACAGAGCCGGAAAATC
AAGTGCATGAATCCCAAACTAAAACCACCGAAAAAGCCTCTGCTCAAACA
GAAAAAGCAACAACAGAGCCGGATAGTGAAGGTTCCATTGAGGAGTTGCG
GAATTACTGTAAATATGTTTCGAGAATGAAACAGGAGAGGAACTTTTACT
TATCAAAACTCCGAGCTATTGATCATATTTGCCAGAAATACAATAGTGGC
CGAGATAGGGTAATCTTAGAAAAGATTACTAAGATTATTTACAGCGAAGC
AAGCTTTCTAGACCAT
BO27176.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:44:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32371-RA | 885 | CG32371-PA | 1..882 | 17..898 | 4410 | 100 | Plus |
CG32371-RA | 885 | CG32371-PA | 468..629 | 568..723 | 295 | 80.2 | Plus |
CG32371-RA | 885 | CG32371-PA | 552..707 | 484..645 | 295 | 80.2 | Plus |
Eb1-RF | 894 | CG3265-PF | 104..381 | 141..418 | 250 | 72.7 | Plus |
Eb1-RG | 876 | CG3265-PG | 104..353 | 141..390 | 245 | 73.2 | Plus |
CG32371-RA | 885 | CG32371-PA | 485..543 | 663..721 | 190 | 88.1 | Plus |
CG32371-RA | 885 | CG32371-PA | 647..705 | 501..559 | 190 | 88.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32371-RA | 1084 | CG32371-RA | 82..963 | 17..898 | 4410 | 100 | Plus |
CG32371-RA | 1084 | CG32371-RA | 549..710 | 568..723 | 295 | 80.2 | Plus |
CG32371-RA | 1084 | CG32371-RA | 633..788 | 484..645 | 295 | 80.2 | Plus |
Eb1-RF | 1891 | CG3265-RF | 299..576 | 141..418 | 250 | 72.7 | Plus |
Eb1-RG | 2043 | CG3265-RG | 206..455 | 141..390 | 245 | 73.2 | Plus |
CG32371-RA | 1084 | CG32371-RA | 566..624 | 663..721 | 190 | 88.1 | Plus |
CG32371-RA | 1084 | CG32371-RA | 728..786 | 501..559 | 190 | 88.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:44:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7767390..7768271 | 898..17 | 4410 | 100 | Minus |
3L | 28110227 | 3L | 7767565..7767720 | 645..484 | 295 | 80.2 | Minus |
3L | 28110227 | 3L | 7767643..7767804 | 723..568 | 295 | 80.2 | Minus |
3L | 28110227 | 3L | 7767567..7767625 | 559..501 | 190 | 88.1 | Minus |
3L | 28110227 | 3L | 7767729..7767787 | 721..663 | 190 | 88.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:44:51 has no hits.
BO27176.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:24 Download gff for
BO27176.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32371-RA | 82..963 | 17..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:10 Download gff for
BO27176.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32371-RA | 82..963 | 17..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:03:00 Download gff for
BO27176.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32371-RA | 82..963 | 17..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:03:00 Download gff for
BO27176.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7767388..7768271 | 17..900 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:10 Download gff for
BO27176.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7760488..7761371 | 17..900 | 99 | | Minus |
BO27176.pep Sequence
Translation from 16 to 916
> BO27176.pep
MSEKSKTSVVNVRYTNKLSSNSSRAEMLSWVNNTLKSQFFKVEELCTGAA
YCQLMDILFARSIPMQRVKFRTNVEYEYIQNFKLLQGCFNKFVVDKIIPI
DRLVKGRYQDNFEFLQWFRKFFDANYESREYDPVIARNGAMLGLGSPPME
AKLRKSVNKSNPQTKPTEESSAQTDRATTEPKNQVYKSNSENKTIEEASA
QTDLAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKY
VSRMKQERNFYLSKLRAIDHICQKYNSGRDRVILEKITKIIYSEASFLDH
BO27176.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32371-PA | 294 | CG32371-PA | 1..294 | 1..294 | 1512 | 100 | Plus |
Eb1-PG | 291 | CG3265-PG | 3..273 | 10..293 | 582 | 44.1 | Plus |
Eb1-PA | 291 | CG3265-PA | 3..273 | 10..293 | 582 | 44.1 | Plus |
Eb1-PD | 291 | CG3265-PD | 3..273 | 10..293 | 582 | 44.1 | Plus |
Eb1-PB | 291 | CG3265-PB | 3..273 | 10..293 | 582 | 44.1 | Plus |