BO27177.complete Sequence
1441 bp assembled on 2010-09-22
GenBank Submission: KX794706
> BO27177.complete
GAAGTTATCAGTCGACATGCCTCGCCTCTCGGTTTTCTGCGGATTATCGC
GTAGAATCATCTGCTCCAGCACTGCTCACCGAAACCTTTGGCGACTGTTG
TCCGACAGTTCGGAGTCGACCATTATCCCACACGTTTCGGACAAAACGGA
AAGTGTGAAGAAATTCAAAAAGGAAACGCAGGTGGATCACACAAGTCACC
TATTTGTATGGCCGGAGGCGAAGGACGAAAACGTTCATCATGTGAAAGAG
AACAAAGAGGATAGCAATGACGATATAACTGCATCCTGGGGCTGGAAAAA
TGACGAGCTTGACGTGGAGCAATTGGCAGGACTACCAAGTCCTAATGAGG
TGGAGGATCCATACCGGCAGCCAAACAATGAATCTCAGGATGATCAGTTG
CCATTCGCTGAAGGAGACCAATCAGGAATTCAAGAAGAATTACAATTCGC
AAGAACGCGCTCCCTGCGAGAACAGCTTGTCAAGAATCAGGCGTCCCAAG
AACCTTTTACCAGCTTTGAGAAAACATCTCTCACATCCGTTCGAAGGAAT
GTGGACTTCATGATGCAAGAGCTTAGTCAGATTTCACTTATTTTGAATAC
TATGGGAGGAGGTGAAAAAACAATGGGGATGGTTAACTCTGAACCGGATG
TGGCTTCCTTTGCACTCAACCAACCCAAAATCAGTGAAAGTTTGAATCAT
GAGGAGGAATCAAATCAGTCAGTGGATAGAGCTAGTTCCCATCAATCTGA
GCTAGGTGTTGCAGATTCTATGCATTCGGAGGTAGCCAGTGCGCTCTCAG
AACCATCTGGATTGGGTGATGTAGAGAGCCTAGATCATAGCGAGATTTCG
AACCAGTCTTTTGATTCCGAACTAACGAGGGATATCACCGATCAACTTAA
ATTGGATCACGAGATGGAAGCAAATCAGTCTTTGGATTCTGAGTTAACCG
GTGAAATAACTAATCAATCTAGTTCGGTAGTTTCAGAGTCTTCGATTTCC
GATGAGGACTTCGGGGAGGAGCTAATAAAACAATCTCACAAAATCGAGCA
AATTGCGTCTGCTGGCGATACTCAAGAGTCCAGTCCTTCAAAAACCAATG
AGAATACTCCCAAGACTGATGACACGCAGGACACTCAGCCTAAGGAAACC
ATACACACCTACAGGCCCTTTAGGACTATCGAAGTTCCTGCCAAGAAGCC
TACTAGTAGCCTTAGCACCGAGTCAATTGAAGAGCAGCCGTTGAACCAGG
AACCCCAATTCGGCACAGGTATCCATTTAGATAGAGAACGGTACAAAGTT
TCTGCTCAGCTGACCGAGTCCGAGTCCCGCTTACTTATGCGCATGGCTCT
GAAGCAGGCTTTAATCGATCTGGAGTCTGGCCAAAGCAAGTACAAAGCAA
CAATTCTGGAGGCTGAAACCGAGGCAAGCTTTCTAGACCAT
BO27177.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:45:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spaw-RB | 1410 | CG30365-PB | 1..1407 | 17..1423 | 7035 | 100 | Plus |
| spaw-RA | 1410 | CG30365-PA | 1..1407 | 17..1423 | 7035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:45:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spaw-RB | 2691 | CG30365-RB | 1233..2641 | 15..1423 | 7045 | 100 | Plus |
| spaw-RA | 1552 | CG30365-RA | 94..1502 | 15..1423 | 7045 | 100 | Plus |
| hubl-RB | 2691 | CG30364-RB | 1233..2641 | 15..1423 | 7045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:45:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8359516..8360924 | 1423..15 | 7045 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 07:45:23 has no hits.
BO27177.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-22 09:24:25 Download gff for
BO27177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30365-RA | 269..1675 | 17..1425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:15 Download gff for
BO27177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spaw-RA | 96..1502 | 17..1425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:03:08 Download gff for
BO27177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hubl-RB | 1235..2641 | 17..1425 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:03:08 Download gff for
BO27177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8359514..8360922 | 17..1425 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:15 Download gff for
BO27177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4247019..4248427 | 17..1425 | 99 | | Minus |
BO27177.pep Sequence
Translation from 16 to 1441
> BO27177.pep
MPRLSVFCGLSRRIICSSTAHRNLWRLLSDSSESTIIPHVSDKTESVKKF
KKETQVDHTSHLFVWPEAKDENVHHVKENKEDSNDDITASWGWKNDELDV
EQLAGLPSPNEVEDPYRQPNNESQDDQLPFAEGDQSGIQEELQFARTRSL
REQLVKNQASQEPFTSFEKTSLTSVRRNVDFMMQELSQISLILNTMGGGE
KTMGMVNSEPDVASFALNQPKISESLNHEEESNQSVDRASSHQSELGVAD
SMHSEVASALSEPSGLGDVESLDHSEISNQSFDSELTRDITDQLKLDHEM
EANQSLDSELTGEITNQSSSVVSESSISDEDFGEELIKQSHKIEQIASAG
DTQESSPSKTNENTPKTDDTQDTQPKETIHTYRPFRTIEVPAKKPTSSLS
TESIEEQPLNQEPQFGTGIHLDRERYKVSAQLTESESRLLMRMALKQALI
DLESGQSKYKATILEAETEASFLDH
BO27177.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spaw-PB | 469 | CG30365-PB | 1..469 | 1..469 | 2381 | 100 | Plus |
| spaw-PA | 469 | CG30365-PA | 1..469 | 1..469 | 2381 | 100 | Plus |
